38 skills found · Page 1 of 2
marbl / VerkkoTelomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and Oxford Nanopore ultra-long reads.
aaranyue / QuarTeTA telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat identification
tolkit / Telomeric IdentifierIdentify and find telomeres, or telomeric repeats in a genome.
zd1 / TelseqA software for calculating telomere length
Adamtaranto / TeloclipA tool for the recovery of unassembled telomeres from soft-clipped read alignments.
Immortal2333 / Telomeres And CentromeresThis is a method to find telomeres and centromeres in plants.
JanaSperschneider / FindTelomeresA python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files
zstephens / Telogator2A method for measuring allele-specific telomere length and characterizing telomere variant repeat sequences from long reads.
lxie-0709 / TeloCompTelomere compliment tools
cancerit / TelomerecatTelomerecat: The telomere computational analysis tool
zstephens / TelogatorA method for measuring chromosome-specific telomere length from long reads
Wenfei-Xian / TIPPTelomere local assembly, Improved whole genome polish, and Plastid assembly
lly1214 / CAU T2T SheepA complete telomere-to-telomere assembly of sheep: T2T-sheep1.0
JiaoLab2021 / PHapA haplotype-resolved and telomere-to-telomere genome assembly pipeline (PHap) tailored for autopolyploids, relying solely on common sequencing data including long-reads and Hi-C.
jaeyoungchoilab / TopsicleTopsicle utilizes abundance of telomere pattern k-mers to estimate telomere length in long read.
LankyCyril / EdgecaseA framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, and for haplotype inference.
lilit-nersisyan / ComputelCompute mean telomere length from Whole Genome Sequencing data.
LHG-GG / I002CTelomere-to-Telomere diploid Indian Genome
jhrf / TelomerecatTelomerecat: The telomere computational analysis tool
Weikai-47 / Pepper T2THere, we report telomere-to-telomere (T2T) gap-free genomes for domesticated pepper Capsicum annuum and wild relative Capsicum rhomboideum.
