7 skills found
ranwez-search / SeqTUIA fast terminal-based viewer and command-line toolkit for molecular sequences (DNA, AA). View, translate, convert (to FASTA), and combine sequences aligned or not — all from the terminal.
ChrisCreevey / CatsequencesA tool for concatenating multiple fasta alignments for supermatrix phylogenetic analyses
wrf / Supermatrixscripts to process, join, split, or add new proteins to a supermatrix alignment using hmms
n8upham / MamPhy V1Code base for Mammalia backbone-and-patch supermatrix project
PatrickKueck / FASconCATFASconCAT is a user-friendly software that concatenates rapidly different kinds of sequence data into one supermatrix file. Output files are either in FASTA, PHYLIP or NEXUS format and are directly loadable in phylogenetic programs like PAUP*, RAxML or MrBayes. FASconCAT can handle FASTA, PHYLIP and CLUSTAL formatted input files in one single run. It provides useful information about each input file and the concatenated supermatrix.
igorrcosta / PhylomitoA python script for mitochondrial supermatrix phylogenomics.
hansiu / MatPhylobia tool for automatic construction of molecular data matrix for phylogenetic inference based on GenBank records
