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FASconCAT

FASconCAT is a user-friendly software that concatenates rapidly different kinds of sequence data into one supermatrix file. Output files are either in FASTA, PHYLIP or NEXUS format and are directly loadable in phylogenetic programs like PAUP*, RAxML or MrBayes. FASconCAT can handle FASTA, PHYLIP and CLUSTAL formatted input files in one single run. It provides useful information about each input file and the concatenated supermatrix.

Install / Use

/learn @PatrickKueck/FASconCAT
About this skill

Quality Score

0/100

Supported Platforms

Universal

README

FASconCAT

FASconCAT is written on Linux and works on WindowsPCs, Macs and Linux running systems. If input files are coming from Windows CRLF line feeds should be converted into Unix (LF) line feeds. This can be done in several editors like e.g. Bioedit or Notepad++. FASconCAT usually replaces them, but might not succeed in every instance. Please read manual instructions for further information.

Related Skills

View on GitHub
GitHub Stars6
CategoryDevelopment
Updated1y ago
Forks7

Languages

Perl

Security Score

55/100

Audited on Feb 8, 2025

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