6 skills found
ShiLab-Bioinformatics / SubreadThe Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon junction detector and featureCounts read summarization program.
nf-core / IsoseqGenome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed annotation.
vivekbhr / Subread To DEXSeqScripts to import your FeatureCounts output into DEXSeq
Juke34 / AliNeNextflow Alignment Pipeline - from fastq.gz to sorted bam/cram with ease
mikolmogorov / PbclipA simple tool to fix PacBio fasta/q that was not properly split into subreads
PacificBiosciences / ActcAlign subreads to ccs reads
