21 skills found
gitHBDX / TransfoRNATransfoRNA: Navigating the Uncertainties of Small RNA Annotation with an Adaptive Machine Learning Strategy
kli28 / SRNAminerNo description available
bioinfoUGR / SRNAtoolboxsmall RNA analysis programs: standalone jar files (sRNAbench, sRNAde, etc), manuals and Docker image
camoragaq / BrumiRBrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.
sRNAworkbenchuea / UEA SRNA Workbenchofficial repository for the UEA sRNA Workbench
joey0214 / Adapter4srna3'Adapter in small RNA sequencing
dengxinb2315 / CCEP SRNAStudy of pan-sRNome and regulatory mechanisms in pseudomonas aeruginosa reveals virulence-related functions of small non-coding RNAs
BleekerLab / Small Rna Seq PipelineA pipeline to annotate miRNAs, phased siRNAs and other types using a reference genome and experimental sRNA-Seq data
fseifert-uhh / Srna HeterosisThis project contains all scripts and Java programs used for bioinformatics analyses in the publication: Seifert et al. (2018) Parental expression variation of small RNAs is negatively correlated with grain yield heterosis in a maize breeding population. Frontiers in Plant Science, doi: 10.3389/fpls.2018.00013
MikeAxtell / SRNA ViewerTools for visualizing plant sRNA-seq alignments, emphasizing RNA sizes
pyajagod / SRNAdeepNo description available
Vicky-Hunt-Lab / HuntLab SmallRNAPipeline to carry out tasks common in the Hunt Lab on small RNA data
BioinformaticsLabAtMUN / SRNARFTargetA random forest-based model to predict transcriptome-wide targets of sRNAs.
phdegnan / SPOTsRNA-target Prediction Organizing Tool
Vicky-Hunt-Lab / StepRNAAlign short RNA seqeuncing reads to determine the length of of overhang
zajakin / SRNAflowsRNAflow – a tool for analysis of small RNA-seq data
SalieriTitor / Project SRNA 2016The scripts used in project
mzytnicki / SrnaMapperNo description available
siamakrostami / SRNavigationBarHelperNo description available
imu93 / SRNAseq NfRNAseq-nf is a nextflow pipeline for small RNA seq analysis tailored for IP and TRaPR experiments.
