51 skills found · Page 1 of 2
cbalbin-bio / Pymol Color AlphafoldPyMOL extension to color AlphaFold structures by confidence (pLDDT).
MengwuXiao / GetBox PyMOL PluginA PyMOL Plugin for calculating docking box for LeDock, AutoDock and AutoDock Vina.
colbyford / PyMOLfoldPlugin for folding sequences directly in PyMOL
MooersLab / PymolshortcutsThe repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websearches from within PyMOL as well as many other convienent functions that make work in PyMOL more productive..
paiardin / DockingPieA Consensus Docking Plugin for PyMOL
pymodproject / PymodPyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
makson96 / DynamicsDynamics PyMOL Plugin
smutao / PyVibMSA PyMOL plugin for visualizing vibrations in molecules and solids
patonlab / WSterimolGenerate Boltzmann-weighted Sterimol Steric Parameters for Conformationally-Flexible Substituents
BioComputingUP / Ring PymolThis is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua
ADplugin / ADpluginAutodock/Vina plugin for PyMol by Daniel Seeliger
smutao / LModeA Nanocalculate chemical bond strength in solids, surfaces and molecules
rasbt / BondPackA collection of PyMOL plugins to visualize atomic bonds.
APAJanssen / Alphafold2importPyMOL plugin to import Alphafold2 models hosted by EMBL, based on fetch-functionality
dkoes / Show ContactsPyMOL Plugin for displaying polar contacts
rinikerlab / RestraintmakerRestraintmaker is a tool intended to build Position or Distance restraints for Molecular Dynamics simulations (or any other simulation technique with coordinate-based particles). It can be used on a script layer or as an interactive plugin for PyMol. Features are different selection modes and Optimizers to distribute restraints.
jaredsampson / PymolprobityA MolProbity-style visualization plugin for PyMOL
LBC-LNBio / ParKVFinderparKVFinder: thread-level parallel KVFinder
Pymol-Scripts / Pymol2 Demo PluginDemo plugin for PyMOL with PyQt
APAJanssen / KinaseDocker2A PyMOL plugin with accompanying Docker image for kinase inhibitor binding and affinity prediction
