62 skills found · Page 2 of 3
aristoteleo / Dynast ReleaseInclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments
mikelove / AsthmaRNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)
tucca-cellag / Tucca Rna SeqTUCCA's RNA-Seq Workflow for Read Quantification, Differential Expression, and Pathway Enrichment Analysis
icbi-lab / QuanTIseqa computational pipeline for the quantification of the Tumor Immune contexture from human RNA-seq data
pachterlab / SBP 2019Code for producing the analysis in the "Quantifying the tradeoff between sequencing depth and cell number in single-cell RNA-seq" manuscript
baymlab / Wastewater AnalysisVariant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification
Vivianstats / AIDEAIDE: annotation-assisted isoform discovery and quantification from RNA-seq data
iRNA-COSI / APAevalCommunity effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differential usage across RNA-seq samples
mcgilldinglab / DOLPHINDOLPHIN: Advances Single-cell RNA-seq Analysis Beyond Gene-Level by Integrating Exon-Level Quantification and Junction Reads with Deep Neural Networks
lemieux-lab / BamQueryBamQuery provides RNA-seq quantification for a given peptide (from 8 to 11 residues) in chosen RNA-seq samples (single or bulk).
AlexsLemonade / Scpca Nfscpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data
itmat / NormalizationRNA-Seq normalization and quantification pipeline
vrmelo / SPLICE QSPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.
skchronicles / RNA SeekA comprehensive quality-control and quantification RNA-seq pipeline
Novartis / EQP ClusterUnix-based RNA-seq quantification pipeline
egaffo / Circompara2Improved bioinformatic pipeline to identify and quantify circRNA expression from RNA-seq data by combining multiple circRNA detection methods
KechrisLab / MiR MaGiCmiRNA quantification from small RNA-seq
xiaofengsong / CircASTCircAST is a computational tool for circular RNA full-length assembly and quantification using RNA-Seq data.
cyaguesa / SL QuantA pipeline to quantify SL trans-splicing events from RNA-seq data
eQTL-Catalogue / RnaseqRNA-seq quantification pipeline used by the eQTL Catalogue
