1,865 skills found · Page 60 of 63
jaechang-hits / regulomedb-databaseQuery RegulomeDB v2 GET REST API to score variants for regulatory function and retrieve overlapping evidence (TF binding, histone marks, DNase peaks, footprints, motifs, eQTLs, chromatin state). Scores range 1a (strongest) to 7 (none).
jaechang-hits / remap-databaseQuery ReMap 2022 TF ChIP-seq peak database via REST API and BED downloads. Retrieve TF peaks overlapping a region (chr:start-end), peaks near a gene, TFs by species, peaks filtered by biotype (promoter, enhancer), and BED files for a TF-cell type pair.
jaechang-hits / ucsc-genome-browserQuery UCSC Genome Browser REST API for DNA sequences, tracks, gene models, and conservation across 100+ assemblies. Retrieve sequence by region, list/fetch BED/bigWig tracks, chromosome sizes, RefSeq/GENCODE gene structures, PhyloP/PhastCons scores.
jaechang-hits / kegg-pathway-analysisGuide to KEGG pathway enrichment for DEG results. Covers ORA vs GSEA, mandatory directionality splitting, KEGG organism codes, API failure handling with offline fallbacks, cross-condition comparisons, and answer-first reporting. Consult when running enrichment with clusterProfiler or gseapy.
giuseppe-trisciuoglio / spring-boot-project-creatorCreates and scaffolds a new Spring Boot project (3.x or 4.x) by downloading from Spring Initializr, generating package structure (DDD or Layered architecture), configuring JPA, SpringDoc OpenAPI, and Docker Compose services (PostgreSQL, Redis, MongoDB)
giuseppe-trisciuoglio / aws-cloudformation-lambdaProvides AWS CloudFormation patterns for Lambda functions, layers, API Gateway integration, event sources, cold start optimization, monitoring, logging, template validation, and deployment workflows
giuseppe-trisciuoglio / langchain4j-tool-function-calling-patternsProvides and generates LangChain4j tool and function calling patterns: annotates methods as tools with @Tool, configures tool executors, registers tools with AiServices, validates tool parameters, and handles tool execution errors
giuseppe-trisciuoglio / spring-boot-crud-patternsProvides and generates complete CRUD workflows for Spring Boot 3 services. Creates feature-focused architecture with Spring Data JPA aggregates, repositories, DTOs, controllers, and REST APIs. Validates domain invariants and transaction boundaries
giuseppe-trisciuoglio / spring-boot-openapi-documentationProvides patterns to generate comprehensive REST API documentation using SpringDoc OpenAPI 3.0 and Swagger UI in Spring Boot 3.x applications
giuseppe-trisciuoglio / unit-test-controller-layerProvides patterns for unit testing REST controllers using MockMvc and @WebMvcTest. Generates controller tests that validates request/response mapping, validation, exception handling, and HTTP status codes
giuseppe-trisciuoglio / aws-lambda-php-integrationProvides AWS Lambda integration patterns for PHP with Symfony using the Bref framework. Creates Lambda handler classes, configures runtime layers, sets up SQS/SNS event triggers, implements warm-up strategies, and optimizes cold starts
giuseppe-trisciuoglio / nextjs-code-reviewProvides comprehensive code review capability for Next.js applications, validates Server Components, Client Components, Server Actions, caching strategies, metadata, API routes, middleware, and performance patterns
giuseppe-trisciuoglio / typescript-docsGenerates comprehensive TypeScript documentation using JSDoc, TypeDoc, and multi-layered documentation patterns for different audiences
giuseppe-trisciuoglio / zod-validation-utilitiesCreates reusable Zod v4 schemas, validates API payloads, forms, and configuration input, transforms and coerces data safely, and handles validation errors with strong type inference for TypeScript applications
giuseppe-trisciuoglio / unit-test-exception-handlerProvides patterns for unit testing `@ExceptionHandler` and `@ControllerAdvice` in Spring Boot applications. Validates error response formatting, mocks exceptions, verifies HTTP status codes, tests field-level validation errors, and asserts custom error payloads
giuseppe-trisciuoglio / aws-lambda-java-integrationProvides AWS Lambda integration patterns for Java with cold start optimization
giuseppe-trisciuoglio / spring-boot-rest-api-standardsProvides REST API design standards and best practices for Spring Boot projects
giuseppe-trisciuoglio / wiremock-standalone-dockerProvides patterns and configurations for running WireMock as a standalone Docker container. Generates mock HTTP endpoints, creates stub mappings for testing, validates integration scenarios, and simulates error conditions
giuseppe-trisciuoglio / aws-lambda-python-integrationProvides AWS Lambda integration patterns for Python with cold start optimization
giuseppe-trisciuoglio / aws-lambda-typescript-integrationProvides AWS Lambda integration patterns for TypeScript with cold start optimization
giuseppe-trisciuoglio / nestjsProvides comprehensive NestJS framework patterns with Drizzle ORM integration for building scalable server-side applications. Generates REST/GraphQL APIs, implements authentication guards, creates database schemas, and sets up microservices
giuseppe-trisciuoglio / unit-test-service-layerProvides patterns for unit testing service layer with Mockito. Creates isolated tests that mock repository calls, verify method invocations, test exception scenarios, and stub external API responses
giuseppe-trisciuoglio / unit-test-wiremock-rest-apiProvides patterns for unit testing external REST APIs using WireMock. Stubs API responses, verifies request details, simulates failures (timeouts, 4xx/5xx errors), and validates HTTP client behavior without real network calls
leiting-eric / daily-briefOperational knowledge for the daily-brief digest pipeline (this project). RSS/API fetchers, pluggable LLM enrichment (default claude CLI on Max; also anthropic/openai/deepseek/minimax API), trading section, HTML rendering, cross-platform scheduler integration (Windows Task Scheduler / macOS launchd…
galleonlabs / hypergrok-trading-deskHyperliquid trading desk for AI agents: 7 roles, 17 skills and keyless market tools. Research first; execution requires your API wallet and approved tickets. Grok Bot, Claude Code, Cursor, Codex, Gemini CLI and Grok Build.
datadrivenconstruction / bim-cost-estimation-cwicrAutomated cost estimation from BIM models using DDC CWICR database (8 national bases, 78,228 positions). AI classification + vector search for accurate pricing.
datadrivenconstruction / json-parserParse and validate JSON data from construction APIs, IoT sensors, and BIM exports. Transform nested JSON to flat DataFrames.
datadrivenconstruction / oce-load-cost-basesLoad national and market cost bases into OpenConstructionERP: the 8 national bases (Turkey Birim Fiyat, China Dinge, Brazil SINAPI, Spain BCCA, Italy Prezzario Toscana, Greece GGDE, Vietnam Dinh Muc, Indonesia AHSP), the 30 global markets, and 48 PPP market catalogs per base
datadrivenconstruction / oce-estimate-boqCreate bills of quantities and estimates in OpenConstructionERP: search cost items, build BOQ sections, link BIM elements in bulk, validate the BOQ, and export GAEB/XLSX/JSON. Use for any estimating workflow on the platform.
datadrivenconstruction / oce-mcp-integrationConnect OpenConstructionERP to AI coding assistants via MCP (Model Context Protocol): expose costs, BOQ, BIM and catalog endpoints as MCP tools so Claude Code / Antigravity / OpenCode can drive the platform
