29 skills found
anthropics / webapp-testingToolkit for interacting with and testing local web applications using Playwright. Supports verifying frontend functionality, debugging UI behavior, capturing browser screenshots, and viewing browser logs.
sickn33 / agent-framework-azure-ai-pyBuild persistent agents on Azure AI Foundry using the Microsoft Agent Framework Python SDK.
K-Dense-AI / gtarsSupports Gtars for local genomic interval models and set algebra, overlaps and counts, consensus and coverage, tokenization, fragment processing, and refget/BEDbase planning across Python, Rust, and the CLI.
K-Dense-AI / phylogeneticsBuilds and analyzes phylogenetic trees using MAFFT multiple sequence alignment, IQ-TREE maximum likelihood with ModelFinder and branch support, and FastTree approximate inference. Uses ETE3 for tree summaries and visualization.
K-Dense-AI / pufferlibVersion-aware guidance for PufferLib reinforcement-learning environments, vectorization, policies, PuffeRL training, evaluation, and safe checkpoint review. Covers the native 5.0 build and environment API, published 3.0.0 Gymnasium/PettingZoo adaptation, and a pinned historical 4.0 profile.
K-Dense-AI / deepspot-mGenerates transcriptome-wide virtual spatial transcriptomics from H&E histology with DeepSpot-M. Used for predicted log1p-CPM expression from 224x224 tiles at about 20x, querying the released protein-coding gene panel by symbol, and whole-slide prediction after resolution-aware tiling with histolab.
K-Dense-AI / depmapRetrieves and analyzes Cancer Dependency Map (DepMap) release data, including CRISPR Chronos gene effects, cancer model annotations, omics biomarkers, and PRISM drug sensitivity.
K-Dense-AI / etetoolkitAnalyzes, manipulates, compares, annotates, and visualizes phylogenetic or other hierarchical trees with ETE 4. Supports Newick/Nexus tree I/O, topology edits and pattern matching, Robinson-Foulds comparisons, gene-tree evolutionary events and reconciliation, NCBI/GTDB taxonomy, SmartView exploratio…
K-Dense-AI / flowkitAnalyzes flow cytometry data with FlowKit, including spillover compensation, logicle and biexponential transforms, hierarchical gating, GatingML strategies, and supported FlowJo 10 workspaces.
K-Dense-AI / scvi-toolsFits probabilistic models for single-cell omics, including scVI batch integration, scANVI annotation, totalVI CITE-seq, MultiVI RNA/ATAC integration, and posterior differential expression.
K-Dense-AI / seabornCreates Seaborn statistical visualizations with pandas integration for distributions, relationships, categorical comparisons, regression displays, pair plots, and heatmaps. Supports function and objects interfaces with explicit aggregation, uncertainty, and missing-data handling.
K-Dense-AI / statsmodelsFits and diagnoses Python statistical models including OLS, GLM, discrete and mixed models, ARIMA and SARIMAX. Supports coefficient inference, marginal effects, model comparison and time series forecasting with explicit design and uncertainty checks.
K-Dense-AI / exa-searchExa search API key.
huggingface / huggingface-gradioBuild Gradio web UIs and demos in Python
trailofbits / devcontainer-setupCreates devcontainers with Claude Code, language-specific tooling (Python/Node/Rust/Go), and persistent volumes
foryourhealth111-pixel / plotlyInteractive scientific and statistical data visualization library for Python
microsoft / azure-ai-voicelive-pyBuild real-time voice AI applications using Azure AI Voice Live SDK (azure-ai-voicelive). Use this skill when creating Python applications that need real-time bidirectional audio communication with Azure AI, including voice assistants, voice-enabled chatbots, real-time speech-to-speech translation,…
FreedomIntelligence / bio-copy-number-cnvkit-analysisDetect copy number variants from targeted/exome sequencing using CNVkit. Supports tumor-normal pairs, tumor-only, and germline CNV calling
aipoch / html-to-pdfConvert HTML files or URLs to high-fidelity PDFs using Puppeteer; auto-detects or forces RTL for Hebrew/Arabic when RTL content is present.
aipoch / pptCreate and export PPTX decks using the local HTML/JS PPT framework in `D:\SKILL\project\ppt`. Use this when you need to generate slides from a topic/outline, edit slide content via `projects/*.js`, preview as HTML, or export a `.pptx` without relying on an existing template.
aipoch / conflict-of-interest-checkerCheck for co-authorship and institutional conflicts between authors and suggested reviewers to support peer review integrity. Coauthorship and institutional conflict detection supported.
aipoch / equipment-maintenance-logTrack lab equipment calibration dates and send maintenance reminders for pipettes, balances, centrifuges, and other instruments. Validates date formats and supports update/delete operations.
aipoch / reagent-expiry-alertScan reagent barcodes or IDs, log expiration dates, and generate multi-level alerts before reagent expiry to support laboratory inventory management.
BankrBot / agenticbetsPlace prediction bets on token prices on Base via AgenticBets
xuzhougeng / compute-env-setupSet up and validate a reproducible Python or R environment on a Wisp execution context. Use for a selected local, WSL, or direct SSH context when installing scientific packages, configuring caches, recording interpreter activation, or producing an environment smoke test.
jaechang-hits / seaborn-statistical-plotsStatistical visualization on matplotlib with native pandas support. Auto aggregation, CIs, grouping for distributions (histplot, kdeplot), categorical (boxplot, violinplot), relational (scatterplot, lineplot), regression (regplot, lmplot), matrix (heatmap, clustermap), grids (pairplot, FacetGrid).
jaechang-hits / pyopenms-mass-spectrometryMS data processing with PyOpenMS for LC-MS/MS proteomics and metabolomics — mzML/mzXML I/O, signal processing (smoothing, peak picking, centroiding), feature detection/linking, peptide/protein ID with FDR, untargeted metabolomics. Use matchms for simple spectral matching.
datadrivenconstruction / cwicr-bid-analyzerAnalyze contractor bids against CWICR benchmarks. Identify pricing anomalies, compare bid components, and support bid evaluation decisions.
datadrivenconstruction / cwicr-subcontractorAnalyze and compare subcontractor bids against CWICR benchmarks. Evaluate pricing, identify outliers, and support negotiation.
