phylogenetics
Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). Visualize with ETE3 or FigTree. For evolutionary analysis, microbial genomics, viral phylodynamics, protein family analysis, and molecular clock studies.
Install / Use
npx skills add K-Dense-AI/scientific-agent-skills --skill phylogeneticsInstalls into whichever agent you are using.
SKILL.md
Installable skill definition
Quality Score
Category
Development & EngineeringSupported Platforms
Tags
Our assessment of phylogenetics
phylogenetics scores 89/100 on our quality scale, 245th of 1,629 Development & Engineering skills we index (top 16%).
We have not analysed the SKILL.md file itself yet, so the content part of this score is an estimate until our crawler reaches it.
With 46,441 GitHub stars, it is one of the more widely adopted skills in the catalogue.
Maintenance, license and trust
- The repository was last updated 3 days ago, so phylogenetics is actively maintained.
- It is released under the MIT license, a permissive license that allows use, modification and commercial use with attribution.
- Its trust signals score 100/100, with no cautions. These come from repository metadata, not a code audit — read the skill file before letting an agent act on it.
phylogenetics compared with similar skills
All 4 of these similar skills score higher than phylogenetics; compare them before choosing.
| Skill | Score | Stars | Updated | Format |
|---|---|---|---|---|
| phylogenetics (this skill)by K-Dense-AI | 89 | 46.4k | 3d ago | SKILL.md |
| ai-job-searchby MadsLorentzen | 100 | 43.9k | 3d ago | CLAUDE.md |
| claude-howtoby luongnv89 | 100 | 41.7k | 5d ago | CLAUDE.md |
| algorithmic-artby anthropics | 100 | 177.9k | 2d ago | SKILL.md |
| pptxby anthropics | 100 | 177.9k | 2d ago | SKILL.md |
Frequently asked questions
- How do I install phylogenetics?
- Run
npx skills add K-Dense-AI/scientific-agent-skills --skill phylogenetics. The install tabs above show the steps for each supported agent. - Which AI agents does phylogenetics work with?
- It is written for Universal, as a SKILL.md file. Other agents that read the same format can often use it too.
- Is phylogenetics safe to use?
- It is MIT-licensed and scores 100/100 on trust signals. Skills are instructions an agent will follow, so read the file before installing it and do not approve commands you do not understand.
- Is phylogenetics still maintained?
- The repository was last updated 3 days ago, so phylogenetics is actively maintained.
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Languages
Trust signals
From repository metadata: license, adoption, age and documentation. Not a code audit — see the Safety scan above for what the skill file itself contains.