587 skills found ¡ Page 17 of 20
jaechang-hits / mouse-phenome-databaseRetrieve mouse phenotype data from the Jackson Laboratory Mouse Phenome Database (MPD) via its REST API. Browse 520+ projects, look up per-project measure metadata, pull strain-level means (raw or LS-mean adjusted) and per-animal values, find measures by MP/VT ontology terms, and resolve strain nomeâĻ
jaechang-hits / quickgo-databaseQuery EBI QuickGO REST API for GO terms and protein annotations. Fetch term metadata by ID, search by keyword, walk ancestor/descendant hierarchies, download annotations filtered by taxon, evidence code, aspect. Use for GO resolution, ontology traversal, annotation retrieval before enrichment.
jaechang-hits / regulomedb-databaseQuery RegulomeDB v2 GET REST API to score variants for regulatory function and retrieve overlapping evidence (TF binding, histone marks, DNase peaks, footprints, motifs, eQTLs, chromatin state). Scores range 1a (strongest) to 7 (none).
jaechang-hits / remap-databaseQuery ReMap 2022 TF ChIP-seq peak database via REST API and BED downloads. Retrieve TF peaks overlapping a region (chr:start-end), peaks near a gene, TFs by species, peaks filtered by biotype (promoter, enhancer), and BED files for a TF-cell type pair.
jaechang-hits / deeptools-ngs-analysisNGS CLI for ChIP/RNA/ATAC-seq. BAMâbigWig with RPGC/CPM/RPKM, sample correlation/PCA, heatmaps/profiles around features, fingerprints. For alignment use STAR/BWA; for peak calling use MACS2.
jaechang-hits / gseapy-gene-enrichmentGSEA and over-representation analysis (ORA) for RNA-seq and proteomics. Wraps Enrichr for ORA against MSigDB, KEGG, GO, and 200+ databases; runs preranked GSEA on ranked DE gene lists. Outputs enrichment tables and running-score plots. Use after DESeq2 or edgeR for pathway-level interpretation.
jaechang-hits / literature-reviewConducting systematic, scoping, and narrative literature reviews. Covers PRISMA/PRISMA-ScR protocols, search strategy (Boolean, MeSH), database selection (PubMed, Scopus, Web of Science, Embase), screening, data extraction, evidence synthesis (narrative, meta-analysis, thematic), and reporting
giuseppe-trisciuoglio / chunking-strategyProvides chunking strategies for RAG systems. Generates chunk size recommendations (256-1024 tokens), overlap percentages (10-20%), and semantic boundary detection methods. Validates semantic coherence and evaluates retrieval precision/recall metrics
giuseppe-trisciuoglio / aws-rds-spring-boot-integrationProvides patterns to configure AWS RDS (Aurora, MySQL, PostgreSQL) with Spring Boot applications. Configures HikariCP connection pools, implements read/write splitting, sets up IAM database authentication, enables SSL connections, and integrates with AWS Secrets Manager
giuseppe-trisciuoglio / unit-test-parameterizedProvides parameterized testing patterns with JUnit 5, generates data-driven unit tests using @ParameterizedTest, @ValueSource, @CsvSource, @MethodSource. Creates tests that run the same logic with multiple input values
giuseppe-trisciuoglio / nestjs-code-reviewProvides comprehensive code review capability for NestJS applications, analyzing controllers, services, modules, guards, interceptors, pipes, dependency injection, and database integration patterns
giuseppe-trisciuoglio / spring-data-neo4jProvides Spring Data Neo4j integration patterns for Spring Boot applications
giuseppe-trisciuoglio / nestjsProvides comprehensive NestJS framework patterns with Drizzle ORM integration for building scalable server-side applications. Generates REST/GraphQL APIs, implements authentication guards, creates database schemas, and sets up microservices
giuseppe-trisciuoglio / spring-data-jpaProvides patterns to implement persistence layers with Spring Data JPA
giuseppe-trisciuoglio / unit-test-service-layerProvides patterns for unit testing service layer with Mockito. Creates isolated tests that mock repository calls, verify method invocations, test exception scenarios, and stub external API responses
giuseppe-trisciuoglio / drizzle-orm-patternsProvides comprehensive Drizzle ORM patterns for schema definition, CRUD operations, relations, queries, transactions, and migrations.
giuseppe-trisciuoglio / nestjs-drizzle-crud-generatorGenerates complete CRUD modules for NestJS applications with Drizzle ORM
AlpacaLabsLLC / product-researchFind and compare current FF&E candidates from a design brief, with sourced purchasing facts and optional CSV-library save. Use to research or source products; not to match from an image or pair coordinating items.
kazukinagata / journalThis skill should be used when the user wants to record bookkeeping entries (äģč¨ŗ), import transaction data from CSV files, receipts, or invoices, or manage their general ledger.
datadrivenconstruction / labor-productivity-analyticsAnalyze construction labor productivity using data analytics. Track worker performance, identify inefficiencies, predict resource needs, and optimize crew allocation for maximum efficiency.
datadrivenconstruction / portfolio-dashboardMulti-project portfolio analytics dashboard. Aggregate KPIs across projects, track portfolio health, compare performance, and support executive decision-making.
datadrivenconstruction / weather-impact-analysisAnalyze weather data impact on construction schedules. Predict weather delays, optimize work scheduling based on forecasts, and calculate weather-related risk factors for project planning.
datadrivenconstruction / dwg-to-excelConvert AutoCAD DWG files (1983-2026) to Excel databases using DwgExporter CLI. Extract layers, blocks, attributes, and geometry data without Autodesk licenses.
datadrivenconstruction / ifc-to-excelConvert IFC files (2x3, 4x1, 4x3) to Excel databases using IfcExporter CLI. Extract BIM data, properties, and geometry without proprietary software.
datadrivenconstruction / cwicr-data-loaderLoad and parse DDC CWICR construction cost database from multiple formats: Parquet, Excel, CSV, Qdrant snapshots. Foundation for all CWICR operations.
datadrivenconstruction / cwicr-historical-costTrack and analyze historical cost data using CWICR. Compare actual vs estimated costs, build project cost database, and improve future estimates.
datadrivenconstruction / cwicr-resource-analyzerAnalyze construction resources (labor, materials, equipment) from DDC CWICR database. Calculate resource requirements, productivity metrics, and optimization recommendations.
datadrivenconstruction / pandas-construction-analysisComprehensive Pandas toolkit for construction data analysis. Filter, group, aggregate BIM elements, calculate quantities, merge datasets, and generate reports from structured construction data.
datadrivenconstruction / pdf-to-structuredExtract structured data from construction PDFs. Convert specifications, BOMs, schedules, and reports from PDF to Excel/CSV/JSON. Use OCR for scanned documents and pdfplumber for native PDFs.
datadrivenconstruction / co2-estimationCalculate carbon footprint of construction projects. Estimate CO2 emissions from materials, transportation, and construction processes using emission factors databases.
