gseapy-gene-enrichment
GSEA and over-representation analysis (ORA) for RNA-seq and proteomics. Wraps Enrichr for ORA against MSigDB, KEGG, GO, and 200+ databases; runs preranked GSEA on ranked DE gene lists. Outputs enrichment tables and running-score plots. Use after DESeq2 or edgeR for pathway-level interpretation.
Install / Use
npx skills add jaechang-hits/SciAgent-Skills --skill gseapy-gene-enrichmentInstalls into whichever agent you are using.
SKILL.md
Installable skill definition
Quality Score
Category
Data & AnalyticsSupported Platforms
Our assessment of gseapy-gene-enrichment
gseapy-gene-enrichment scores 83/100 on our quality scale, 465th of 573 Data & Analytics skills we index.
We have not analysed the SKILL.md file itself yet, so the content part of this score is an estimate until our crawler reaches it.
It has 367 GitHub stars, a meaningful sign that others use it.
Maintenance, license and trust
- The repository was last updated 37 days ago, so gseapy-gene-enrichment is actively maintained.
- No license is declared. By default that means all rights are reserved: you can read it, but reusing or redistributing it is not clearly permitted. Ask the author before building on it commercially.
- Its trust signals score 88/100, with 1 caution from licensing, adoption, age or documentation. These come from repository metadata, not a code audit — read the skill file before letting an agent act on it.
gseapy-gene-enrichment compared with similar skills
All 4 of these similar skills score higher than gseapy-gene-enrichment; compare them before choosing.
| Skill | Score | Stars | Updated | Format |
|---|---|---|---|---|
| gseapy-gene-enrichment (this skill)by jaechang-hits | 83 | 367 | 37d ago | SKILL.md |
| Agent-Reachby Panniantong | 100 | 91.2k | 19d ago | CLAUDE.md |
| headroomby headroomlabs-ai | 100 | 74.4k | today | CLAUDE.md |
| Scraplingby D4Vinci | 100 | 85.7k | today | MCP Server |
| crawl4aiby unclecode | 100 | 84.8k | 10d ago | MCP Server |
Frequently asked questions
- How do I install gseapy-gene-enrichment?
- Run
npx skills add jaechang-hits/SciAgent-Skills --skill gseapy-gene-enrichment. The install tabs above show the steps for each supported agent. - Which AI agents does gseapy-gene-enrichment work with?
- It is written for Universal, as a SKILL.md file. Other agents that read the same format can often use it too.
- Is gseapy-gene-enrichment safe to use?
- It declares no license and scores 88/100 on trust signals. Skills are instructions an agent will follow, so read the file before installing it and do not approve commands you do not understand.
- Is gseapy-gene-enrichment still maintained?
- The repository was last updated 37 days ago, so gseapy-gene-enrichment is actively maintained.
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Languages
Trust signals
From repository metadata: license, adoption, age and documentation. Not a code audit — see the Safety scan above for what the skill file itself contains.