K-Dense-AI
Showing 121–159 of 159 skills · Page 3 of 3
K-Dense-AI / zarr-python
46.4kChunked N-D arrays for cloud storage (Zarr-Python 3). Compressed arrays, parallel I/O, S3/GCS via fsspec, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines.
K-Dense-AI / anndata
46.4kData structure for annotated matrices in single-cell analysis
K-Dense-AI / arboreto
46.4kInfer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3)
K-Dense-AI / cellxgene-census
46.4kQuery the CZ CELLxGENE Census programmatically for versioned public single-cell and spatial transcriptomics data
K-Dense-AI / dask
46.4kDistributed computing for larger-than-RAM pandas/NumPy workflows
K-Dense-AI / database-lookup
46.4kQuery documented public database APIs with explicit endpoints, filters, pagination, and provenance
K-Dense-AI / deepspot-m
46.4kGenerate transcriptome-wide virtual spatial transcriptomics from H&E histology with DeepSpot-M
K-Dense-AI / networkx
46.4kCreate, analyze, and visualize complex networks and graphs in Python with NetworkX
K-Dense-AI / nextflow
46.4kBuild, run, and debug Nextflow data pipelines and nf-core workflows end to end
K-Dense-AI / paperzilla
46.4kChat with your agent about projects, recommendations, and canonical papers in Paperzilla
K-Dense-AI / pathway-enrichment
46.4kRun pathway and gene-set enrichment analysis on gene lists or ranked gene data, then interpret the results
K-Dense-AI / pennylane
46.4kHardware-agnostic quantum ML framework with automatic differentiation
K-Dense-AI / pyzotero
46.4kZotero library type: ''user'' or ''group'' (default ''user'').
K-Dense-AI / statistical-power
46.4kSample-size and statistical power calculations for planning studies
K-Dense-AI / autoskill
46.4kOptional Foundry access for drafting.
K-Dense-AI / benchling-integration
46.4kStaging API key (multi-env setups).
K-Dense-AI / biopython
46.4kNCBI API key to raise Entrez rate limits.
K-Dense-AI / bioservices
46.4kEmail for NCBI service identification.
K-Dense-AI / cirq
46.4kGoogle quantum computing framework
K-Dense-AI / citation-management
46.4kContact email for the faster OpenAlex polite pool.
K-Dense-AI / generate-image
46.4kOpenRouter API key used for image generation.
K-Dense-AI / infographics
46.4kOpenRouter API key for the skill's LLM-powered steps.
K-Dense-AI / markdown-mermaid-writing
46.4kComprehensive markdown and Mermaid diagram writing skill
K-Dense-AI / matplotlib
46.4kLow-level plotting library for full customization
K-Dense-AI / modal
46.4kOptional database URL for examples.
K-Dense-AI / neuropixels-analysis
46.4kFor optional Claude API calls.
K-Dense-AI / omero-integration
46.4kSecure transport toggle; default true.
K-Dense-AI / open-notebook
46.4kEncryption key for stored content, if configured.
K-Dense-AI / openpiv
46.4kParticle Image Velocimetry (PIV) analysis with OpenPIV
K-Dense-AI / protocolsio-integration
46.4kBearer token for authenticated protocols.io REST reads.
K-Dense-AI / pysam
46.4kPython/HTSlib workflows for genomic files
K-Dense-AI / research-lookup
46.4kOptional OpenRouter key for explicit Perplexity use.
K-Dense-AI / rowan
46.4kRowan computational chemistry API key.
K-Dense-AI / scikit-learn
46.4kMachine learning in Python with scikit-learn
K-Dense-AI / scvi-tools
46.4kDeep generative models for single-cell omics
K-Dense-AI / statsmodels
46.4kStatistical models library for Python
K-Dense-AI / tamarind
46.4kTamarind Bio API key sent as the x-api-key header.
K-Dense-AI / exa-search
46.4kExa search API key.
K-Dense-AI / parallel-web
46.4kParallel API key.