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Showing 121–180 of 13,465 skills · Page 3 of 225

K-Dense-AI / onekgpd

46.4k

Queries the 1000 Genomes Project dataset (3,202 whole-genome-sequenced individuals, GRCh38) at the level of individual participants

📄 SKILL.mduniversal
skill
100
Updated 1mo ago

K-Dense-AI / opentrons-integration

46.4k

Authors, reviews, migrates, simulates, and troubleshoots official Opentrons Python Protocol API v2 protocols for Flex and OT-2 robots. Use for robot-specific liquid handling, deck and labware setup, pipettes, modules, runtime parameters, liquid classes, and Opentrons App analysis.

📄 SKILL.mduniversal
skillapireview+1
100
Updated 1mo ago

K-Dense-AI / paper-lookup

46.4k

Searches 18 scholarly APIs for papers, preprints, citations, open-access full text, repository records, and journal OA status, and returns results with reproducible provenance.

📄 SKILL.mduniversal
skillapipdf
100
Updated 1mo ago

K-Dense-AI / paperclip

46.4k

Paperclip API key from https://paperclip.gxl.ai/keys. Existing OAuth credentials also work; installation and help do not require a key.

📄 SKILL.mduniversal
skillapisql+1
100
Updated 1mo ago

K-Dense-AI / pathogen-variant-surveillance

46.4k

Queries public GenSpectrum LAPIS data for pathogen genomic surveillance, current lineage nomenclature, weekly sequence proportions, reporting delays, and descriptive mutation frequencies.

📄 SKILL.mduniversal
skillapi
100
Updated 1mo ago

K-Dense-AI / pathway-enrichment

46.4k

Performs pathway and gene-set enrichment analysis on gene lists or ranked gene data and interprets the results. Used when the user has a set of genes (differentially expressed genes from PyDESeq2/Scanpy, CRISPR-screen hits, cluster marker genes, proteomics hits) and wants to know which biological pa…

📄 SKILL.mduniversal
skill
100
Updated 1mo ago

K-Dense-AI / peer-review

46.4k

Prepares evidence-bounded, constructive peer-review drafts and structured manuscript assessments. Supports authorized review of scientific manuscripts, protocols, preprints, or research proposals; reporting-guideline selection; claim–evidence checks; methods, statistics, reproducibility, ethics, fig…

📄 SKILL.mdzed
skillreviewimage+1
100
Updated 1mo ago

K-Dense-AI / phylogenetics

46.4k

Builds and analyzes phylogenetic trees using MAFFT multiple sequence alignment, IQ-TREE maximum likelihood with ModelFinder and branch support, and FastTree approximate inference. Uses ETE3 for tree summaries and visualization.

📄 SKILL.mduniversal
skillpython
100
Updated 1mo ago

K-Dense-AI / pkpd-modeling

46.4k

Pharmacokinetic and pharmacodynamic modelling and simulation - non-compartmental analysis, compartmental and population PK, PK/PD and exposure-response, TMDD, PBPK orientation, bioequivalence, allometric scaling and first-in-human dose, drug interaction prediction, and Bayesian therapeutic drug moni…

📄 SKILL.mdsourcegraph cody
skill
100
Updated 1mo ago

K-Dense-AI / polars-bio

46.4k

Performs genomic interval overlap, nearest, merge, coverage, complement and subtraction on Polars DataFrames, and reads or writes BED, VCF, BCF, BAM, CRAM, GFF, GTF, FASTA and FASTQ data.

📄 SKILL.mduniversal
skillsqlpython+1
100
Updated 1mo ago

K-Dense-AI / primer-design

46.4k

Designs and audits PCR and RT-qPCR primers with Primer3, explicit thermodynamic conditions, reference-based off-target amplification searches, and traceable sequence coordinates.

📄 SKILL.mduniversal
skilldesignpython
100
Updated 1mo ago

K-Dense-AI / pufferlib

46.4k

Version-aware guidance for PufferLib reinforcement-learning environments, vectorization, policies, PuffeRL training, evaluation, and safe checkpoint review. Covers the native 5.0 build and environment API, published 3.0.0 Gymnasium/PettingZoo adaptation, and a pinned historical 4.0 profile.

📄 SKILL.mduniversal
skillapireview+1
100
Updated 1mo ago

K-Dense-AI / pydeseq2

46.4k

Performs bulk RNA-seq differential expression analysis with PyDESeq2, including count validation, formula designs, explicit contrasts, Wald tests, FDR correction, coefficient-matched LFC shrinkage, and result visualization. Use for PyDESeq2 or Python DESeq2 workflows with biological replicates.

📄 SKILL.mduniversal
skilldesignpython
100
Updated 1mo ago

K-Dense-AI / pydicom

46.4k

Reads, inspects, writes, transforms, and preflights local DICOM datasets and pixel data. Applies to DICOM metadata, transfer syntaxes, compression plugins, frames, private elements, JSON, and bounded de-identification review.

📄 SKILL.mdzed
skillreviewpython
100
Updated 1mo ago

K-Dense-AI / pymatgen

46.4k

Analyzes, validates, converts, and transforms materials structures and computed materials data with pymatgen. Use for local phase diagrams, symmetry sensitivity, electronic-structure I/O, and bounded Materials Project queries.

📄 SKILL.mduniversal
skillapipython
100
Updated 1mo ago

K-Dense-AI / pysam

46.4k

Provides Python/HTSlib workflows for genomic files. Used when reading, querying, filtering, or writing SAM/BAM/CRAM, VCF/BCF, FASTA/FASTQ, or tabix data with pysam, including pileup, coverage, indexing, and CRAM references.

📄 SKILL.mduniversal
skillreviewpython
100
Updated 1mo ago

K-Dense-AI / pytdc

46.4k

Provides Therapeutics Data Commons workflows through PyTDC for registry discovery, dataset access, task-aware splits, evaluator metrics, benchmark groups, and bounded molecular-oracle scoring

📄 SKILL.mduniversal
skillpython
100
Updated 1mo ago

K-Dense-AI / qutip

46.4k

Simulate and audit closed and open quantum-system models with QuTiP 5, including deterministic, trajectory, steady-state, spectral, and phase-space workflows. Use for local quantum-dynamics work where physical assumptions, dimensions, and numerical convergence must be explicit.

📄 SKILL.mduniversal
skillpython
100
Updated 1mo ago

K-Dense-AI / relsa-severity-assessment

46.4k

Supports multivariate severity assessment and exploratory endpoint-time score forecasting for laboratory animal studies using the RELSA (RELative Severity Assessment) score and ARIMA-based foRcast forecasting

📄 SKILL.mduniversal
skill
100
Updated 1mo ago

K-Dense-AI / scanpy

46.4k

Performs Scanpy single-cell RNA-seq QC, normalization, HVG selection, PCA/UMAP/t-SNE, clustering, exploratory marker ranking, pseudobulk preparation, visualization, and Seurat or SingleCellExperiment RDS conversion to h5ad.

📄 SKILL.mduniversal
skillpython
100
Updated 1mo ago

K-Dense-AI / scientific-brainstorming

46.4k

Facilitates evidence-aware scientific ideation with independent generation, structured discussion, explicit assumptions, transparent evaluation, adversarial review, and decision logs.

📄 SKILL.mduniversal
skilldesignreview+1
100
Updated 1mo ago

K-Dense-AI / scientific-visualization

46.4k

Creates and audits truthful, accessible, publication-ready scientific figures with Matplotlib, Seaborn, or Plotly. Use it for figure design, multi-panel layouts, uncertainty and missing-data displays, color/contrast review, image metadata validation, and journal export planning.

📄 SKILL.mduniversal
skilldesignreview+3
100
Updated 1mo ago

K-Dense-AI / scientific-writing

46.4k

Drafts, revises, and audits scientific manuscripts or reports with explicit evidence provenance, reporting-guideline coverage, authorship accountability, confidentiality controls, and local consistency checks.

📄 SKILL.mduniversal
skillapipython
100
Updated 1mo ago

K-Dense-AI / scikit-bio

46.4k

Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis.

📄 SKILL.mduniversal
skillreviewpython
100
Updated 1mo ago

K-Dense-AI / scikit-survival

46.4k

Builds, evaluates, and audits right-censored or competing-risk survival workflows with scikit-survival, including leakage-safe preprocessing, model selection, probability prediction, and censoring-aware metrics.

📄 SKILL.mduniversal
skillreviewpython
100
Updated 1mo ago

K-Dense-AI / shap

46.4k

Explain and audit machine-learning predictions with SHAP. Use for selecting SHAP explainers and maskers, computing and validating feature attributions, handling multi-output explanations, and producing local or global SHAP visualizations.

📄 SKILL.mduniversal
skillreviewpython
100
Updated 1mo ago

K-Dense-AI / simpy

46.4k

Builds, inspects, tests, and analyzes bounded process-based discrete-event simulations with SimPy. Use for event scheduling, resource queues, interrupts, monitoring, independent replications, warm-up, and reproducible output analysis.

📄 SKILL.mduniversal
skillreviewpython
100
Updated 1mo ago

K-Dense-AI / statistical-analysis

46.4k

Guided statistical analysis for research data - test selection, assumption checking, effect sizes, power analysis, Bayesian alternatives, and APA-formatted reporting

📄 SKILL.mduniversal
skillapi
100
Updated 1mo ago

K-Dense-AI / statistical-power

46.4k

Calculates sample sizes and statistical power for study planning. Applies when someone asks "how many subjects/samples/replicates do I need", wants an a priori power analysis, a minimum detectable effect (MDE), a power curve, or needs to justify a sample size for a grant, IRB protocol, or pre-regist…

📄 SKILL.mdzed
skilldesign
100
Updated 1mo ago

K-Dense-AI / tiledbvcf

46.4k

Stores and retrieves genomic variant calls with TileDB-VCF. Use for indexed single-sample VCF/BCF ingestion, incremental cohorts, region and sample queries, streaming results, allele statistics, QC, and VCF/BCF export locally or through TileDB Cloud.

📄 SKILL.mduniversal
skillreviewpython
100
Updated 1mo ago

K-Dense-AI / timesfm-forecasting

46.4k

Performs zero-shot time-series forecasting with Google's TimesFM, including regular-grid CSV preparation, quantile forecasts, XReg covariates, and held-out evaluation.

📄 SKILL.mduniversal
skillapipython
100
Updated 1mo ago

Yuan1z0825 / nature-downloader

44.3k

Use when a user needs lawful academic full text, CNKI institutional access, English OA retrieval, publisher API access, institutional browser fallback, or supporting information downloads.

📄 SKILL.mdzed
skillapipython
100
Updated 1mo ago

vercel-labs / core

43.1k

Core agent-browser usage guide. Read this before running any agent-browser commands. Covers the snapshot-and-ref workflow, navigating pages, interacting with elements (click, fill, type, select), extracting text and data, taking screenshots, managing tabs, handling forms and auth, waiting for conten…

📄 SKILL.mduniversal
skill
100
Updated 1mo ago

emilkowalski / animation-performance

40.8k

Keep web animations inside the frame budget — animate composite-only properties, keep motion off the main thread when the page is busy, and find the cause when an animation drops frames.

📄 SKILL.mduniversal
skillapireact
100
Updated 1mo ago

emilkowalski / animation-vocabulary

40.8k

Reverse-lookup glossary that turns a vague description of a web animation or motion effect into its exact term ("the bouncy thing when a popover opens" → Pop in; "the iOS rubber-band scroll" → Rubber-banding)

📄 SKILL.mduniversal
skilldesign
100
Updated 1mo ago

emilkowalski / mobile-native

40.8k

Make a web app feel native on a phone — the small CSS and meta-tag fixes that separate "a website in a browser" from something that feels installed.

📄 SKILL.mduniversal
skillreview
100
Updated 1mo ago

github / ad-campaign-analyzer

39.3k

Use this skill when the user shares ad campaign performance data and asks what to cut, scale, or test. Trigger for prompts like "analyze my ad campaigns", "where am I wasting ad spend", "reallocate my ad budget", "which ads are actually working", or "ROAS analysis".

📄 SKILL.mduniversal
skill
100
Updated 29d ago

github / agent-governance

39.3k

Patterns and techniques for adding governance, safety, and trust controls to AI agent systems. Use this skill when: - Building AI agents that call external tools (APIs, databases, file systems) - Implementing policy-based access controls for agent tool usage - Adding semantic intent classification t…

📄 SKILL.mduniversal
skillapirust+2
100
Updated 29d ago

github / arize-dataset

39.3k

Creates, manages, and queries Arize datasets and examples. Covers dataset CRUD, appending examples, exporting data, and file-based dataset creation using the ax CLI

📄 SKILL.mduniversal
skill
100
Updated 29d ago

github / arize-evaluator

39.3k

Handles LLM-as-judge evaluation workflows on Arize including creating/updating evaluators, running evaluations on spans or experiments, managing tasks, trigger-run operations, column mapping, and continuous monitoring

📄 SKILL.mduniversal
skill
100
Updated 29d ago

github / arize-experiment

39.3k

Creates, runs, and analyzes Arize experiments for evaluating and comparing model performance. Covers experiment CRUD, exporting runs, comparing results, and evaluation workflows using the ax CLI

📄 SKILL.mduniversal
skill
100
Updated 29d ago

github / arize-prompt-optimization

39.3k

Optimizes, improves, and debugs LLM prompts using production trace data, evaluations, and annotations. Extracts prompts from spans, gathers performance signal, and runs a data-driven optimization loop using the ax CLI

📄 SKILL.mduniversal
skill
100
Updated 29d ago

github / arize-trace

39.3k

Downloads, exports, and inspects existing Arize traces and spans to understand what an LLM app is doing or debug runtime issues. Covers exporting traces by ID, spans by ID, sessions by ID, and root-cause investigation using the ax CLI

📄 SKILL.mduniversal
skill
100
Updated 29d ago

github / automate-this

39.3k

Analyze a screen recording of a manual process and produce targeted, working automation scripts. Extracts frames and audio narration from video files, reconstructs the step-by-step workflow, and proposes automation at multiple complexity levels using tools already installed on the user machine.

📄 SKILL.mduniversal
skillautomation
100
Updated 29d ago

github / aws-resource-query

39.3k

Query AWS resources using natural language. Covers EC2, S3, RDS, Lambda, ECS, EKS, Secrets Manager, IAM, VPC, networking, messaging, and more. Strictly read-only — no writes, deletes, or mutations.

📄 SKILL.mduniversal
skillaws
100
Updated 29d ago

github / breakdown-plan

39.3k

Issue Planning and Automation prompt that generates comprehensive project plans with Epic > Feature > Story/Enabler > Test hierarchy, dependencies, priorities, and automated tracking.

📄 SKILL.mduniversal
skilltestinggit+3
100
Updated 29d ago

github / code-tour

39.3k

Use this skill to create CodeTour .tour files — persona-targeted, step-by-step walkthroughs that link to real files and line numbers.

📄 SKILL.mduniversal
skillreview
100
Updated 29d ago

github / codeql

39.3k

Comprehensive guide for setting up and configuring CodeQL code scanning via GitHub Actions workflows and the CodeQL CLI. This skill should be used when users need help with code scanning configuration, CodeQL workflow files, CodeQL CLI commands, SARIF output, security analysis setup, or troubleshoot…

📄 SKILL.mduniversal
skillgitsecurity+1
100
Updated 29d ago

github / competitor-ad-intelligence

39.3k

Use this skill when the user asks to analyze, tear down, or reverse-engineer a competitor''s paid ads. Trigger for prompts like "what ads is [competitor] running", "tear down their ad strategy", "competitor ad analysis", "find ad angles we haven''t tried", or "reverse-engineer their paid funnel".

📄 SKILL.mduniversal
skillapi
100
Updated 29d ago

github / copilot-cli-quickstart

39.3k

Use this skill when someone wants to learn GitHub Copilot CLI from scratch. Offers interactive step-by-step tutorials with separate Developer and Non-Developer tracks, plus on-demand Q&A. Just say "start tutorial" or ask a question!

📄 SKILL.mdvscode copilot
skillgitsql+2
100
Updated 29d ago

github / dependabot

39.3k

Comprehensive guide for configuring and managing GitHub Dependabot. Use this skill when users ask about creating or optimizing dependabot.yml files, managing Dependabot pull requests, configuring dependency update strategies, setting up grouped updates, monorepo patterns, multi-ecosystem groups, sec…

📄 SKILL.mduniversal
skillgitmcp+2
100
Updated 29d ago

github / draw-io-diagram-generator

39.3k

Use when creating, editing, or generating draw.io diagram files (.drawio, .drawio.svg, .drawio.png). Covers mxGraph XML authoring, shape libraries, style strings, flowcharts, system architecture, sequence diagrams, ER diagrams, UML class diagrams, network topology, layout strategy, the hediet.vscode…

📄 SKILL.mduniversal
skill
100
Updated 29d ago

github / flowstudio-power-automate-build

39.3k

Build, scaffold, and deploy Power Automate cloud flows using the FlowStudio MCP server. Your agent constructs flow definitions, wires connections, deploys, and tests — all via MCP without opening the portal.

📄 SKILL.mduniversal
skillmcp
100
Updated 29d ago

github / flowstudio-power-automate-debug

39.3k

Debug failing Power Automate cloud flows using the FlowStudio MCP server. The Graph API only shows top-level status codes. This skill gives your agent action-level inputs and outputs to find the actual root cause.

📄 SKILL.mduniversal
skillapimcp
100
Updated 29d ago

github / flowstudio-power-automate-governance

39.3k

Govern Power Automate flows and Power Apps at scale using the FlowStudio MCP cached store. Classify flows by business impact, detect orphaned resources, audit connector usage, enforce compliance standards, manage notification rules, and compute governance scores — all without Dataverse or the CoE St…

📄 SKILL.mduniversal
skillmcp
100
Updated 29d ago

github / flowstudio-power-automate-mcp

39.3k

Foundation skill for Power Automate via FlowStudio MCP — auth setup, the reusable MCP helper (Python + Node.js), tool discovery via `list_skills` / `tool_search`, and oversized-response handling. Load this skill first when connecting an agent to Power Automate.

📄 SKILL.mdzed
skillmcppython
100
Updated 29d ago

github / flowstudio-power-automate-monitoring

39.3k

Pro+ subscription required. Tenant-wide Power Automate monitoring using the FlowStudio MCP cached store: failure rates, run-health trends, maker/app inventory, inactive owners, and compliance/health reports. Use only for aggregated tenant views.

📄 SKILL.mduniversal
skillmcp
100
Updated 29d ago

github / github-release

39.3k

Guides IA through releasing a new version of a GitHub library end-to-end. Handles SemVer versioning and Keep a Changelog formatting automatically.

📄 SKILL.mduniversal
skillgitgithub
100
Updated 29d ago

mukul975 / Anthropic-Cybersecurity-Skills

34.9k

817 structured cybersecurity skills for AI agents · Mapped to 6 frameworks: MITRE ATT&CK, NIST CSF 2.0, MITRE ATLAS, D3FEND, NIST AI RMF & MITRE F3 (Fight Fraud) · agentskills.io standard · Works with Claude Code, GitHub Copilot, Codex CLI, Cursor, Gemini CLI & 20+ platforms · 29 security domains ·…

🤖 CLAUDE.mdclaude codecursor+3
claudetestinggit+4
99
Updated 1mo ago

nanocoai / nanoclaw

31.0k

A lightweight alternative to OpenClaw that runs in containers for security. Connects to WhatsApp, Telegram, Slack, Discord, Gmail and other messaging apps,, has memory, scheduled jobs, and runs directly on Anthropic's Agents SDK

🤖 CLAUDE.mdclaude code
claudesecurityslack+1
99
Updated 9h ago