merfishing

Code for MERFISH analysis

Getting started

Please refer to the documentation.

Installation

You need to have Python 3.8 or newer installed on your system. If you don't have Python installed, we recommend installing Miniconda.

1. Install the newest version

pip install git+https://github.com/lhqing/merfishing.git@main

2. Install the development version

git clone https://github.com/lhqing/merfishing.git
cd merfishing
pip install -e ".[test,dev]"