SkillAgentSearch skills...

Thoraxe

Use Thor's Axe to cut exons into their evolutionary building blocks :zap:

Install / Use

/learn @PhyloSofS-Team/Thoraxe
About this skill

Quality Score

0/100

Supported Platforms

Universal

README

ThorAxe

Assessing Conservation of Alternative Splicing with Evolutionary Splicing Graphs

Status |Linux |Windows
:-------------------------:|:-------------------------|:------------------------- Project Status: Inactive – The project has reached a stable, usable state but is no longer being actively developed; support/maintenance will be provided as time allows. | Build Status<br/>Coverage Status | Build status<br/>codecov

Please refer to the documentation for installation instructions and more information.

Check out our video tutorial to see how you can easily use ThorAxe and visualise the results! If you want to know more, you can read our Genome Research publication:

Zea DJ, Laskina S, Baudin A, Richard H, Laine E. Assessing conservation of alternative splicing with evolutionary splicing graphs. Genome Research. 2021 Jun 15:gr-274696. doi: 10.1101/gr.274696.120.

You can install ThorAxe from PyPI and run it locally. You can also use our Docker image or run it online with interactive outputs thanks to the Ases web server.

Related Skills

View on GitHub
GitHub Stars12
CategoryDevelopment
Updated1mo ago
Forks5

Languages

Python

Security Score

95/100

Audited on Feb 3, 2026

No findings