14 skills found
biocommons / HgvsPython library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).
tatsy / Normalizing Flows PytorchPyTorch implementations of normalizing flow and its variants.
schwa23 / CleanupsfuiSketch Plugin to clean up SF UI/Pro fonts character spacing & normalize text & display variants.
genomics-dev / VariantkeyNumerical Encoding for Human Genetic Variants
TRON-Bioinformatics / Covigator Ngs PipelineA Nextflow pipeline for NGS variant calling on SARS-CoV-2. From FASTQ files to normalized and annotated VCF files from GATK, BCFtools, LoFreq and iVar.
cancervariants / Variation NormalizationServices and guidelines for normalizing variants
milekpl / Zotero NerZotero name normalizer — detect and fix author name variants (diacritics, initials, spelling), publisher names, location names, and journal titles for cleaner bibliographic metadata
fulcrumgenomics / Ferro HgvsA high-performance HGVS variant nomenclature parser and normalizer written in Rust
pinellolab / Crispr BeanBase Editing screens' Activity-Normalized variant effect size estimation
ybracke / TransnormerA lexical normalizer for historical spelling variants using a transformer architecture.
TRON-Bioinformatics / Tronflow Vcf PostprocessingA Nextflow variant normalization pipeline based on vt and bcftools
SMByC / ArrNorm Qgis ProcessingIt is a Qgis processing plugin for apply the radiometric normalization to the target image based on reference image using the IR-MAD algorithm to locate invariant/variant pixels for a relative radiometric normalization
alexseysua / Mini UAV DetectionToolkit for UAV object detection: lightweight YOLO variants enhanced with channel/spatial attention modules and a Normalized Wasserstein Distance (NWD) metric. Includes motion-aware GL‑YOMO pipeline (multi-frame motion detection, Kalman filter), training/inference scripts, and dataset utilities for fast experimentation on small/remote objects.
julius-muller / VcfcacheAccelerate variant annotation by caching common variants. Build a normalized blueprint, annotate once, and reuse across samples. Genome-agnostic and tool-agnostic. Achieve 2.5-5× speed-ups for typical workflows.
