132 skills found · Page 1 of 5
satijalab / SeuratR toolkit for single cell genomics
scverse / Scvi ToolsDeep probabilistic analysis of single-cell and spatial omics data
zhanghao-njmu / SCPAn end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
scverse / SquidpySpatial Single Cell Analysis in Python
Teichlab / Scg Lib StructsCollections of library structure and sequence of popular single cell genomic methods
10XGenomics / Cellranger10x Genomics Single Cell Analysis
scverse / CellrankCellRank: dynamics from multi-view single-cell data
openproblems-bio / OpenproblemsFormalizing and benchmarking open problems in single-cell genomics
theislab / ScarchesReference mapping for single-cell genomics
satijalab / Seurat WrappersCommunity-provided extensions to Seurat
NVIDIA-Genomics-Research / Rapids Single Cell ExamplesExamples of single-cell genomic analysis accelerated with RAPIDS
theislab / ScgenSingle cell perturbation prediction
scverse / SnapATAC2Single-cell epigenomics analysis tools
dpeerlab / PalantirSingle cell trajectory detection
samuel-marsh / ScCustomizeR package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
enblacar / SCpubrGenerate high quality, publication ready visualizations for single cell transcriptomics data.
compbiomed / SingleCellTKInteractively analyze single cell genomic data
dpeerlab / SEACellsSEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data
mojaveazure / Seurat DiskInterfaces for HDF5-based Single Cell File Formats
campbio / CeldaBayesian Hierarchical Modeling for Clustering Single Cell Genomic Data
