Results for "seqfish"

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11 skills found

CaiGroup / SeqFISH PLUS

No description available

universal

Updated 4mo ago

HaojiaWu / CellScopes.jl

A Julia package for single cell and spatial data analysis

universal

bioinformaticscartanadata-viz+11

Updated 15d ago

estellad / SpatialExperimentIO

Read in Xenium, CosMx, Vizgen, STARmap PLUS, seqFISH data as Spatial or SingleCell Experiment object.

universal

Updated 2mo ago

MarioniLab / SpatialMouseAtlas2020

Data processing and analysis scripts for our spatial profiling of embryos using seqFISH

universal

Updated 2mo ago

ankitbioinfo / Nico Tutorial

A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and statistically enriched covariation of gene programs between interacting cell types from the neighborhood.

universal

merfishniche-covariationniche-modelling+7

Updated 3mo ago

CaiGroup / Dna Seqfish Plus

dna seqfish image analysis code

universal

Updated 1y ago

CaiGroup / Intron SeqFISH

used for intron seqFISH

universal

Updated 3y ago

PierreBSC / Pipeline SeqFISH

No description available

universal

Updated 3y ago

CaiGroup / Dna Seqfish Plus Tissue

DNA seqFISH+ tissue analysis code and probe sequences

universal

Updated 3y ago

MonashBioinformaticsPlatform / Seqfish Hack

seqFISH+ data in tidy format for a mini-hackathon

universal

Updated 2y ago

CaiGroup / Dna Seqfish Plus Multi Omics

Spatial multi-omics analysis code and additional resources

universal

Updated 10mo ago