29 skills found
FelixKrueger / TrimGaloreA wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data
clojure / Core.rrb VectorRRB-Trees in Clojure
nf-core / MethylseqMethylation (Bisulfite-Sequencing) analysis pipeline using Bismark/bwa-meth + MethylDackel or bwa-mem + rastair
hypirion / C RrbRRB-tree implemented as a library in C.
igordot / SnsAnalysis pipelines for genomic sequencing data
TiarkRompf / RrbtreesRRB-Trees: Efficient Immutable Vectors
ben-laufer / DMRichRA R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
def- / Rrbrrb is a simple set of scripts to take backups by hand and automatically by a backup server using rsync and manage them.
michalmarczyk / FlexvecRRB-Trees for Clojure(Script) -- see Bagwell & Rompf (moved into Clojure Contrib as of 2013-03-29, see https://github.com/clojure/core.rrb-vector)
arazabishov / Pvec RsA persistent, RRB-Tree based vector for Rust
aryeelab / Bisulfite Seq ToolsSuite of tools to conduct methylation data analysis. Methods from this workspace can be used for alignment and quality control analysis for various protocols including Whole Genom Bisulfite Sequencing (WGBS), Reduced Representation Bisulfite Sequencing (RRBS) and Hybrid Selection Bisulfite Sequencing (HSBS).
hhg7 / DefiantDifferential methylation: Easy, Fast, Identification and ANnoTation
funkia / Purescript Rrb ListHighly efficient immutable list powered RRB-trees implementing the Data.Array API
wishfoundry / RrbitAn Immutable vectors/lists/arrays library using the Relaxed Radix Balancing(RRB) technique
cgswords / Racket RrbRacket RRB Tree Implementation
nugentechnologies / NuMetRRBSNo description available
ftabaro / MethylSnakeA Snakemake pipeline for RRBS data analysis
jleluyer / Epigenetics WorkflowPipeline for RRBS data analysis without a reference genome
xash / ArrayImplements Arrays with a RRB-Tree backend in JavaScript for ELM.
rrbit-org / Lib Rrbitcore operations for RRB Vectors
