8 skills found
saezlab / DorotheaR package to access DoRothEA's regulons
aertslab / SCopeLoomRR package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters and markers, ...
Dingpw / Endothelial Cell Heterogeneity And Microglia Regulons Revealed By A Pig Cell Landscape At Single CelNo description available
OSU-BMBL / IRIS3IRIS3: Integrated Cell-type-specific Regulon Inference Server from Single-cell RNA-Seq (https://bmbl.bmi.osumc.edu/iris3/)
aertslab / IRegulonA regulon consists of a transcription factor (TF) and its direct transcriptional targets, which contain common TF binding sites in their cis-regulatory control elements. The iRegulon plugin allows you to identify regulons using motif and track discovery in an existing network or in a set of co-regulated genes.
SUwonglab / CReguloncRegulon is an optimization model to identify combinatorial regulon from single cell expression and chromatin accessibility data.
aertslab / LoomXpyPython package (compatible with SCope) to create .loom files and extend them with other data e.g.: SCENIC regulons
OSU-BMBL / CeRISCell-type-specific Regulon Inference from Single-cell RNA-Seq
