35 skills found · Page 1 of 2
COMBINE-lab / Salmon🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
vivekuppal / TranscribeTranscribe is a real time transcription, conversation, Language learning platform. It provides live transcripts from microphone and speaker. It generates a suggested conversation response using OpenAI's GPT API. It will read out the responses, simulating a real live conversation in English or another language.
GoekeLab / BambuReference-guided transcript discovery and quantification for long read RNA-Seq data
ablab / IsoQuantTranscript discovery and quantification with long RNA reads (Nanopores and PacBio)
Oshlack / JAFFAJAFFA is a multi-step pipeline that takes either raw RNA-Seq reads, or pre-assembled transcripts, then searches for gene fusions
nanoporetech / Pipeline Transcriptome DePipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads
Oshlack / CorsetSoftware for clustering de novo assembled transcripts and counting overlapping reads
trinker / TextreadrTools to uniformly read in text data including semi-structured transcripts
tcsenpai / YoulamaYouLama is a web application that allows users to generate summaries or easy to read transcripts of YouTube videos using AI-powered language models.
ksahlin / IsONclustDe novo clustering of long transcript reads into genes
a-slide / NanoCountEM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2
ksahlin / IsONcorrectError correction of ONT transcript reads
csikasote / BembaSpeechThis is an ASR corpus for Bemba language. It contains read speech from diverse publicly available Bemba sources; Literature Books, Radio/TV shows transcripts, Youtube Video transcripts, Online sources. The corpus has 14, 438 utterances culminating into over 24 hours of speech.
zarazhangrui / Lark Minutes TasksAI agent skill: read Lark meeting transcripts, extract action items, and actually get them done
TrinityCTAT / CTAT LR Fusionfusion transcript detection using long reads, leveraging ctat-minimap2 and FusionInspector
zoharbabin / Google Researcher MCPThis is a Model Context Protocol (MCP) server that enables AI assistants like Claude, GPT, and other LLMs to: Search the web via Google (general, images, news) Read any webpage including JavaScript-rendered sites Extract YouTube transcripts automatically Parse documents (PDF, DOCX, PPTX)
guigolab / TmergeMerge transcriptome read-to-genome alignments into non-redundant transcript models
aljpetri / IsONclust3De novo clustering of long transcript reads into genes
GoekeLab / Bambu Singlecell SpatialTranscript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu
IBM / Video Summarizer Using WatsonIn this code pattern you will learn about building a robust solution for analyzing the video or audio files to quickly generate meaningful summary & insights using different Deep learning and Machine learning approaches. You will also learn about improving the readibility of the transcripts with IBM Watson Speech to Text speech recognition models, how to optimize the parameteres, train different speech to text models and learn about different state of the art language models used for summarizing the text.
