63 skills found · Page 1 of 3
YongxinLiu / QIIME2ChineseManualQIIME 2中文文档(QIIME 2 Chinese Manual)
biocore / QiimeOfficial QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.
nf-core / AmpliseqAmplicon sequencing analysis workflow using DADA2 and QIIME2
jbisanz / Qiime2RImport qiime2 artifacts to R
MaestSi / MetONTIIMEA Meta-barcoding pipeline for analysing ONT data in QIIME2 framework
biocore / GemelliGemelli is a tool box for running Robust Aitchison PCA (RPCA), Joint Robust Aitchison PCA (Joint-RPCA), TEMPoral TEnsor Decomposition (TEMPTED), and Compositional Tensor Factorization (CTF) on sparse compositional omics datasets.
biocore / EmpressA fast and scalable phylogenetic tree viewer for microbiome data analysis
colinbrislawn / Unite Train🍄 Qiime2 ITS classifiers for the UNITE database
cafferychen777 / MicrobiomeStatTrack, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat
sbslee / DokdoA Python package for microbiome sequencing analysis with QIIME 2
jcmcnch / EASV Pipeline For 515Y 926RThis is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools
DeniRibicic / Q2ONTBash pipeline for analysis of ONT full-length 16S sequences in QIIME2
Gibbons-Lab / Isb Course 2022Materials and presentation for the 2022 ISB Microbiome course.
farhadm1990 / 16S RRNA AmpliconAnalysis of (gut) microbiome in Qiime2 and R.
Gibbons-Lab / Isb Course 2023Materials and presentation for the 2023 ISB Microbiome course.
attayeb / SnaqQiime2 snakemake pipeline
shu251 / Tagseq Qiime2 SnakemakePipeline to run qiime2 with snakemake
mghotbi / DspikeInThe importance of converting relative to absolute abundance in the context of microbial ecology: Introducing the user-friendly DspikeIn R package
wijerasa / Qiime2 Pipeline16s Qiime2 pipeline
kaanb93 / Q2 KronaImplementation of Krona to QIIME2
