17 skills found
thierrygosselin / RadiatorRADseq Data Exploration, Manipulation and Visualization using R
edgardomortiz / CaptusAssembly of Phylogenomic Datasets from High-Throughput Sequencing data
Rinoahu / SwiftOrthoA high performance tool to identify orthologs and paralogs across genomes.
VIB-PSB / Ksratesksrates is a tool to position whole-genome duplications relative to speciation events using substitution-rate-adjusted mixed paralog-ortholog Ks distributions.
chaoszhang / A ProASTRAL for PaRalogs and Orthologs
jsdoublel / DISCODecomposition Into Single-COpy gene trees (DISCO) is a method for decomposing multi-copy gene-family trees while attempting to preserve orthologs and discard paralogs.
gillislab / Pansol Expression AnalysisAnalysis of paralog expression profiles across 22 solanum species
edgardomortiz / Paralog FinderDetects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)
gjmckinney / HDplotparalog identification using population-level NGS data
tseemann / Noary🍣 🦐 A lightweight nucleotide bacterial ortholog clustering tool
AEVO-lab / HyPPOHybrid Prediction of Paralogs and Orthologs
Fulgione-group / ParaMaskCode for the ParaMask and simulations of paralogs
ChrisCreevey / Clan CheckCheck trees for compatibility with defined groupings in unrooted trees - "The incontestable clan test"
vivekruhela / MiRPipemiRPipe: Open source RNA-Seq bioinformatics analysis docker for identification of miRNAs and piRNAs
littlegq / MixcrFilterTo filter out TCR clones which are falsely recognized by MiXCR from paralog sequences
leg0 / Paralog ToolsThis repo contains tools to work with Paralog (popular skydiving logbook software) database (e.g. import GPS logs, generate a web site, ...)
V-Z / Hybseq ScriptsSet of scripts to process HybSeq target enrichment HTS data (on computing grids).
