15 skills found
hms-dbmi / VivLibrary for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
ome / OpenmicroscopyOME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded by private and public research grants, OME has been a major force on the international microscopy stage since 2000.
HohlbeinLab / OpenMicroscopyNon-comprehensive list of projects and resources related to open microscopy.
scifio / ScifioSCientific Image Format Input & Output: a flexible, extensible framework for image I/O. *EXPERIMENTAL* All API is subject to change, so depend at your own risk! See also @openmicroscopy/bioformats.
ome / Omero Server DockerOMERO.server production docker image
ome / Omero MetadataOMERO plugin for metadata manipulation https://www.openmicroscopy.org/omero/
manics / Kubernetes OmeroKubernetes Helm charts for OMERO
ome / Ome DockerDocker files for http://github.com/openmicroscopy
ome / Omero Web DockerOMERO.web production docker image
ome / Vsftpd Anonymous Upload DockerVsftpd Docker image for anonymous FTP uploads only
ome / Www.openmicroscopy.orgOME main website
ome / Ansible Role Postgresql BackupBackup PostgreSQL database servers
IDR / Idr.openmicroscopy.orgSource for the IDR static website.
ome / Ansible Role Iptables RawAnsible module to import iptables_raw library
ome / Ansible Role Minio S3 GatewayMinio S3 gateway with additional restricted users
