213 skills found · Page 1 of 8
lh3 / Minimap2A versatile pairwise aligner for genomic and spliced nucleotide sequences
dib-lab / KhmerIn-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
epam / KetcherWeb-based molecule sketcher
benjjneb / Dada2Accurate sample inference from amplicon data with single nucleotide resolution
arpcard / RgiResistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
ncbi / AmrAMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.
amplab / SnapScalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data
nanoporetech / TomboTombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.
widdowquinn / PyaniApplication and Python module for average nucleotide identity analyses of microbes.
keithwhor / NtSeqJavaScript (node + browser) bioinformatics library for nucleotide sequence manipulation and analysis.
gosling-lang / Gosling.jsGrammar of Scalable Linked Interactive Nucleotide Graphics
ksamuk / PixySoftware for painlessly estimating average nucleotide diversity within and between populations
sstadick / PerbasePer-base per-nucleotide depth analysis
Daniel-Liu-c0deb0t / Cute NucleotidesCute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
yuanx749 / Py CdhitA Python package for CD-HIT, clustering protein or nucleotide sequences.
BioFSharp / BioFSharpOpen source bioinformatics and computational biology toolbox written in F#. This is the core package containing type models and parsers/writers.
refresh-bio / VclustFast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes
bacpop / PopPUNKPopPUNK 👨🎤 (POPulation Partitioning Using Nucleotide Kmers)
WGLab / DeepModDeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications
GSLBiotech / MafftAlign multiple amino acid or nucleotide sequences.
