23 skills found
scverse / Muonmuon is a multimodal omics Python framework
SONGDONGYUAN1994 / ScDesign3scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics
PMBio / MuDataSeurat.h5mu files interface for Seurat
PYangLab / ScMultiBenchMulti-task benchmarking of single-cell multimodal omics integration methods
PYangLab / MatildaMatilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-modality of such data and trains a neural network model to simultaneously learn multiple tasks including data simulation, dimension reduction, visualization, classification, and feature selection.
scverse / Muon TutorialsTutorials for multimodal omics data analysis
Lucas-rbnt / MORPHEUSMasked Omics Modeling for Multimodal Representation Learning across Histopathology and Molecular Profiles
FuduanPeng / LungPCA CodeMultimodal Spatial-Omics Reveal Co-Evolution of Alveolar Progenitors and Proinflammatory Niches in Progression of Lung Precursor Lesions
prmshra / SingleCellDataMultimodal single-cell data API, for adding information for -omics like scRNA-seq as well as ATAC-seq, spatial transcriptomics, hyperspectral, methylation(s) and imaging data per cell across modalities in streaming.
nvahmadi / MONAI MultimodalMultimodal fusion/Mulit-omics in MONAI
ilia-kats / MuDataMuData-compatible storage for bioconductor's MultiAssayExperiment
lilyuc / Muonmuon is a multimodal omics Python framework
PYangLab / SnapCCESSEnsemble deep learning of embeddings for clustering multimodal single-cell omics data
HakimBenkirane / Multimodal CustOmicsMultimodal CustOmics: A Unified and Interpretable Multi-Task Deep Learning Framework for Multimodal Integrative Data Analysis in Oncology
xjtu-omics / SpatialCOC OldSpatialCOC is a multimodal integration framework for spatial multi-omics data.
ljw-struggle / Pymmdbsingle-cell multimodal omics database
PKU-BDBA / HTMLCode for Highly Trustworthy Multimodal Learning (HTML) Method on Omics
Chengwenwen1 / ScMMO Atlassingle-cell multimodal omics data analysis
SuixueWang / POMPA pathology-omics multimodal pre-training framework for cancer survival prediction.
mamun41 / MOMLIN SoftwarMultimodal and Omics Machine learning integration for drug response biomarker discovery
