17 skills found
grimmlab / MicrobiomeBestPracticeReviewCurrent Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
liubingdong / EasyMultiProfilerThe EasyMultiProfiler package aims to offer a user-friendly and efficient multi-omics data analysis tool on the R platform. It facilitates various essential tasks related to microbiome, genome, and metabolite downstream analysis, providing a seamless workflow from start to finish.
cafferychen777 / MicrobiomeStatTrack, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat
NBISweden / AMetaAncient microbiome snakemake workflow
Gibbons-Lab / MbtoolsR package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.
biobakery / MetawibeleMetaWIBELE: Workflow to Identify novel Bioactive Elements in microbiome
anwarMZ / CoMWComparative Metatranscriptomics Workflow
alexmsalmeida / Ml MicrobiomeSnakemake workflow to perform machine learning classification of microbiome sequence data
cafferychen777 / MicrobiomeStat Turtorial Professional VersionMicrobiomeStat Tutorial Repository: This is a comprehensive resource for learning how to use the MicrobiomeStat package. It provides a step-by-step guide to effectively analyze complex microbiome data.
biocorecrg / Microbiome ProceduresMothur procedures for 16S and ITS analysis
rusher321 / MicrobiotaPairAn R Package for Simplified Microbiome Analysis Workflows on Intervention Study
bhattlab / AWIGen2MicrobiomeRepository for the AWI-Gen 2 microbiome project workflows, analysis, and results.
JuliaTurkuDataScience / MicrobiomeAnalysis.jlFunctions and workflows for the analysis of microbiome data.
Benjamin-Valderrama / SaMBA PipelineWorkflow to build archives of 16s faecal microbiome samples from neglected populations.
alexmsalmeida / LatinbiotaCentral repository with scripts and workflows for the analysis of the gut microbiome of the Latinbiota cohort
linsalrob / Atavide LiteA simpler version of atavide that relies only on slurm or PBS scripts. Some of the settings are specific for our compute resources
TomC-93 / Tree Root Microbiome ProjectThe scripts contained in this repository relate directly to the work conducted by the Tree Root Microbiome Project (TRMP) led by Dr Steve Wakelin.
