Results for "macs2"

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10 skills found

nf-core / Chipseq

234

ChIP-seq peak-calling, QC and differential analysis pipeline.

universal

chipchip-seqchromatin-immunoprecipitation+6

Updated 17d ago

ay-lab / ATACProc

ATAC-seq processing pipeline

universal

atac-seqatacseqqcmacs2+1

Updated 6mo ago

ay-lab / ChIPLine

ChIP-seq analysis pipeline

universal

chip-seqidrmacs2+1

Updated 1y ago

mforde84 / ENCODE TF ChIP Pipeline

minimal pipeline for SPP and MACS2 peak calling plus secondary IDR analysis

universal

Updated 2y ago

HuntsmanCancerInstitute / MultiRepMacsChIPSeq

Multiple-replica multiple-condition ChIPSeq pipeline

universal

atac-seqchip-seqchromatin+2

Updated 1d ago

crazyhottommy / Genrich Compare

snakemake workflow comparing Genrich and MACS2

universal

Updated 2y ago

skchronicles / PeakCalling

Benchmarking ChIP-seq peak callers

universal

broad-peakschip-seqdfilter+8

Updated 2y ago

CCBR / CARLISLE

Cut And Run anaLysIS pipeLinE calls peaks using MACS2, SEACR and GoPeaks on spike-in normalized input fastqs.

zed

pipelineworkflow

Updated 19d ago

andysaurin / Macs2 Idr

Call IDR peaks using MACS2

universal

Updated 6y ago

Gaulton-Lab / Peak Call Pipeline

Scripts and instructions for calling peaks from single nucleus ATAC-seq data using MACS2

universal

Updated 1y ago