9 skills found
anuradhawick / Kmertoolskmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and more
CalabreseLab / SeekrA library for counting small kmer frequencies in nucleotide sequences.
nf-core / Kmermaidk-mer similarity analysis pipeline
slowikj / SeqRfast and comprehensive k-mer counting package
pnnl / MercatMerCat: python code for versatile k-mer counting and diversity estimation for database independent property analysis for meta -ome data
jtnystrom / DiscountVery large scale k-mer counting and analysis on Apache Spark.
raw-lab / Mercat2MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data
BioJulia / KmerAnalysis.jlK-mer counting algorithms and count-data utilities for the BioJulia framework
suchapalaver / Fastas2kmersA naive implementation of a k-mer counter in Python, takes fasta files and k-mer length requests and outputs all k-mers of length k, their reverse complement, and their frequency within their respective sequence for each sequence in the file.
