62 skills found · Page 1 of 3
immunomind / Immunarch🧬 immunarch [R package] – Multi-Modal Immune Repertoire Analytics for Immunotherapy and Vaccine Design
griffithlab / PVACtoolsNo description available
mims-harvard / COMPASSGeneralizable AI predicts immunotherapy outcomes across cancers and treatments
livnatje / ImmuneResistanceThis resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources of T cell exclusion linked to immunotherapy clinical outcomes".
mims-harvard / MedeaMedea: An omics AI agent for therapeutic discovery
openvax / VaxrankRanked vaccine peptides for personalized cancer immunotherapy
mikelove / PreNivolumabOnNivolumabEDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
YuLab-SMU / TigeR🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package
riazn / Bms038 AnalysisCode and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for manuscript https://doi.org/10.1016/j.cell.2017.09.028 See also http://www.ioexplorer.org for interactive visuallization
immunomind / Covid19🦠 Regularly updated list of publicly available datasets with single-cell (scRNAseq) and T-cell/antibody immune repertoire (AIRR / RepSeq / immunosequencing) data of COVID-19 patients with SARS-CoV-2.
bm2-lab / PTuneospTuneos: prioritizing Tumor neoantigen from next-generation sequencing data
XSLiuLab / Tumor Immunogenicity ScoreTIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
Xinglab / IRISIRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
Junjie-Hu / NSCLC ImmunotherapyNo description available
xjtu-omics / Msisensor RnaMSIsensor-RNA: Microsatellite instability detection using RNA sequencing data
lrgr / Multifactorial Immune ResponseMultifactorial modeling of response to checkpoint inhibitor immunotherapy from tumor, immune, and clinical features
sysbio-curie / MultipitFusion strategies to build multimodal predictors for the prediction of immunotherapy response in non-small cell lung cancer
ylab-hi / ScanNeo2Snakemake-based computational workflow for neoantigen prediction from diverse sources
rootchang / LORISLORIS: A LOgistic Regression-based Immunotherapy-response Score
crazyhottommy / Immunotherapy ScRNAseq PapersNo description available
