30 skills found
svalkiers / ClusTCRCDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offering functionalities for downstream analysis of clustering results.
andrewrech / Antigen.garnishNo description available
jostmey / MaxSnippetModelStatistical classifier for immune repertoires
imminfo / Tcr[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.
uio-bmi / CompairrComparison of Adaptive Immune Receptor Repertoires
rnabioco / DjvdjAn R package to analyze single-cell V(D)J data
wuaipinglab / ImmuCCCell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.
leonjessen / PepToolsPepTools - An Immunoinformatics (Immunological Bioinformatics) R-package for working with peptide data
lkuchenb / MultiHLAWES HLA Typing based on multiple alternative tools
slowkow / Hlabud🐶 hlabud: HLA genotype analysis in R
BenTenmann / SetriqFast string distance computation in Python
yutanagano / SceptrHighly informative TCR representation model
mnielLab / NetTCR 2.2Sequence-based prediction of peptide-TCR interactions using paired chain data
dhuvik / Tcr TranslateAccompanying Repository to TCR-TRANSLATE paper.
raghavagps / Algpred2A machine learning based method for predicting, scanning and mapping allergenic regions in an allergen
yutanagano / TidytcellsStandardise TR/MH/IG data
meyer-lab-cshl / BATMANBayesian inference of Activation of TCR by Mutant Antigens
LBC-LNBio / ESMIFDesignESMDesign uses ESM-IF1 for the design of fragments within multichain proteins
MikePodsytnik / TCRtrieFast trie-based search for TCR sequences with Levenshtein and substitution matrix support
snaketron / IgGeneUsageComparison of gene usage in immune repertoires under different biological conditions
