137 skills found · Page 1 of 5
Image-Py / ImagepyImage process framework based on plugin like imagej, it is esay to glue with scipy.ndimage, scikit-image, opencv, simpleitk, mayavi...and any libraries based on numpy
ijpb / MorphoLibJCollection of mathematical morphology methods and plugins for ImageJ
zitmen / ThunderstormThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging
deepimagej / Deepimagej PluginThe ImageJ plugin to run deep-learning models
lmb-freiburg / Unet SegmentationThe U-Net Segmentation plugin for Fiji (ImageJ)
segment-anything-models-java / SAMJ IJAn ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.
imagej / Example Legacy PluginSimple Maven project for an ImageJ 1.x plugin
trakem2 / TrakEM2ImageJ plugin for morphological data mining, 3D modeling and image stitching, registration, editing and annotation.
stardist / Stardist ImagejStarDist plugin for ImageJ
Biomedical-Imaging-Group / OrientationJImageJ's plugin for directional analysis in images: color-coded analysis, distribution of orientation, vector field, keypoint detection
fiji / AnalyzeSkeletonImageJ/Fiji plugin to analyze 2D and 3D skeleton images
ilastik / Ilastik4ijImageJ plugins to run ilastik workflows
mdoube / BoneJA collection of plugins for bone image analysis in ImageJ
UU-cellbiology / ZstackDepthColorCodeZ-stack Depth Colorcode ImageJ FIJI plugin
fiji / BUnwarpJImageJ/Fiji plugin for consistent elastic registration of 2D images
spreka / AnnotatorjAnnotatorJ: ImageJ plugin for object annotation in 2D
ij-plugins / Ijp ColorPlugins for ImageJ - color space conversions and color calibration
dterstege / FASTMAPImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing
ariel-waisman / LabelsToROIsA Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification
UU-cellbiology / CurveTraceCurve tracing ImageJ plugin
