24 skills found
EddyRivasLab / HmmerHMMER: biological sequence analysis using profile HMMs
althonos / PyhmmerCython bindings and Python interface to HMMER3.
PedroMTQ / MantisA package to annotate protein sequences
sestaton / HMMER2GOAnnotate DNA sequences for Gene Ontology terms
TravisWheelerLab / BATHBetter Alignments with Translated HMMER
BFL-lab / MfannotMFannot is a program for the annotation of mitochondrial and plastid genomes
arendsee / RhmmerSimple R utilities for working with HMMER
EnzoAndree / HmmPyA Pure-Python parser of HMMER3 output
seanrjohnson / EsmologsLocal homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.
NAL-i5K / Genomics WorkspaceDjango website project for common sequence search tools.
djw533 / HamburgerHMmer Based UndeRstandinG of gene clustERs
Arkadiy-Garber / MagicLampA platform for targeted annotation of (meta)genomic and (meta)transcriptomic datasets using HMM sets.
Robaina / PyntenyQuery sequence database by HMMs arranged in predefined synteny structure
fedorrik / HumAS HMMER For AnVILNo description available
seanrjohnson / Hmmer3dihmmer3 and easel patched to support the 3di alphabet.
MinhyukPark / HMMergeNo description available
nawrockie / Jiffy Infernal Hmmer ScriptsSimple perl scripts for dealing with infernal and/or hmmer output/input.
minillinim / SimpleHMMERSuper simple wrapper for running hmmer3 and parsing the output
kblin / Bioperl Hmmer3BioPerl modules for HMMER3
wwood / Hmmer RsErgonomic Rust interface to HMMER
