6 skills found
mkerin / LEMMALEMMA (Linear Environment Mixed Model Analysis) aims to uncover GxE interactions between SNPs and a linear combination of multiple environmental variables.
Biometris / StatgenGxESee https://biometris.github.io/statgenGxE for a full description
AlexiaJM / LEGITAn R package for the Latent Environmental & Genetic InTeraction (LEGIT) model
andywdahl / GxemmLinear mixed model to fit polygenic GxE
ErickNavarroD / RAMENRegional Association of DNA Methylome variability with the Exposome and geNome (RAMEN) is an R package which goal is to identify Variable Methylated Loci (VML) in microarray DNA methylation data. Then, using genome (G) and exposome (E) data, it can identify which individual (G or E) or joint (G+E or GxE) model better explains the VML variability.
NataliaZemlianskaia / GessoThe package is developed to fit a regularized regression model that we call gesso [G(by)E(la)sso] for the joint selection of gene-environment (GxE) interactions.
