35 skills found · Page 1 of 2
BojarLab / GlycoworkPackage for processing and analyzing glycans and their role in biology.
xichengeva / DeepGlycanSiteNo description available
mobiusklein / GlypyGlycan Analysis and Glycoinformatics Library for Python
BojarLab / CandyCrunchPredicting glycan structure from LC-MS/MS data
tlemmin / GlycosylatorFramework for the rapid modeling glycans and glycoproteins.
ibmm-unibe-ch / GlycosylatorA Python framework for the rapid modeling of glycans
midas-wyss / SweettalkDeep learning-based language model for glycan sequences
BojarLab / SweetNetGraph convolutional neural networks for analyzing glycans [LEGACY; use glycowork implementation]
kalininalab / GlyLESA tool to convert IUPAC representations of glycans into SMILES strings.
mobiusklein / GlycresoftAn LC-MS/MS glycan and glycopeptide search engine
BojarLab / LectinOracleDeep learning model to predict interactions between proteins and glycans [LEGACY; use glycowork implementation]
GlycanML / GlycanMLNo description available
Protea-Glycosciences / GlyComboGlyCombo, a combinatorial glycan composition assignment tool
Ojas-Singh / Re GlycoThe Python software re-glycosylates protein structures using MD simulation results from the glycoshape database. It takes alphafold protein structures as input and outputs modified structures with glycans added at appropriate sites.
glygen-glycan-data / PyGlyPython module for parsing, writing, aligning, and manipulating glycan structrures
glycoinfo / GlycanBuilder2No description available
kasawa1234 / GlycanAAThe official codebase of the paper Modeling All-Atom Glycan Structures via Hierarchical Message Passing and Multi-Scale Pre-training.
BIOS-IMASL / AzaharA PyMOL plugin for construction, visualization and analysis of glycan molecules. https://www.ncbi.nlm.nih.gov/pubmed/27549814
lthomes / GlycontactGlyContact: a Python package for retrieving, processing, and analyzing 3D glycan structures.
JervenBolleman / Glycan.rdfGlycan database standardisation effort (superseded draft see GlycoRDF)
