12 skills found
nf-core / ScrnaseqSingle-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-droplet detection
Hoohm / DropSeqPipeA SingleCell RNASeq pre-processing snakemake workflow
Hoohm / CITE Seq CountA tool that allows to get UMI counts from a single cell protein assay
BIMSBbioinfo / PigxPipelines in genomics
aselewa / DropseqRunnerLightweight pipeline for processing droplet-based single-cell RNA-seq data
dibbelab / Singlecell BcatlasBreast Cancer Single Cell Atlas
BIMSBbioinfo / Pigx ScrnaseqPipeline for analysis of Dropseq single cell data
chensong611 / SNARE Prepdropseq-based single nuclei genomic accessibility and RNA expression (SNARE-seq) preprocessing pipeline
intelliriffer / DROPSEQ SEQUENCERA unique Weight & Drop Based Dynamic Midi Note Sequencer** for Akai Force, Akai MPC, Raspberry Pi and Max Osx (intel)
ComputationalSystemsBiology / Single Cell RNA SeqWorkflows for handling automatic single-cell RNA seq analysis
darneson / DropSeqNo description available
mccrowjp / DropseqPipeline for automation of Drop-seq data analysis
