17 skills found
kevinblighe / ClinicalGradeDNAseqAutomated next generation DNA sequencing analysis pipeline suited for clinical tests, with >99.9% sensitivity to Sanger sequencing at read-depth>18
Phillip-a-richmond / GenomeAnalysisModuleWelcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees in the UBC MSc Genetic Counselling Training Program, as they embark on a journey to learn about analyzing genomes.
Bgi-LUSH / LUSH DNASeq PipelineFast and accurate DNASeq Variant Calling workflow composed of LUSH-toolkits
Sentieon / Sentieon DnaseqSentieon DNAseq
NCI-GDC / Gdc Dnaseq CwlCWL for GDC DNASeq workflows
HuntsmanCancerInstitute / USeq180+ Java applications for analyzing next generation sequencing data from ChIPSeq, RNASeq, BisSeq, DNASeq, variant annotation/ filtering, alignment/VCF QC, capture array design, IGV/ DAS2/IGB/UCSC file manipulation, etc. Both GUI and cmd line interfaces.
crazyhottommy / Single Cell DNAseq NotesNo description available
plagnollab / DNASeq PipelinePipeline in place at the UGI for DNA level analysis
jokergoo / Crypt DNASequenceEncrypt and decrypt strings to DNA Sequences
JovMaksimovic / Bpipe PipelinesBasic bpipe pipeline stages and pipelines for RNA/DNAseq analysis.
markowetzlab / ScDNAseq Workflowcalling absolute copy numbers on single cell DNA sequencing data - stagging repo for public release
robertdouglasmorrison / DuffyNGSR package for Next Gen Sequencing; with pipelines for RNAseq, DNAseq, ChIPseq, RIPseq, etc.
Sentieon / Aws Benchmark ScriptsScripts used in benchmarking Sentieon DNAseq and DNAscope pipelines on AWS EC2
vladsavelyev / CawdorCancer analysis workflow (DNAseq or RNAseq)
ncsa / Sentieon DNASeq BenchmarkingBenchmarking scripts
YanCotta / DNASequenceAnalysisToolA comprehensive Python tool for DNA sequence analysis that provides various molecular biology and bioinformatics functions.
emptyewer / DEEPNA Bioinformatics software workflow to process data generated by Illumina next-gen sequencing technique.
