30 skills found
lhatsk / AlphaLinkAlphaLink: Integrating crosslinking MS data into OpenFold
circuitvalley / USB3 MIPI CSI2 RX V2 Crosslink NXMIPI CSI-2 Camera Sensor Receiver V2 Verilog HDL implementation For any generic FPGA. Tested with IMX219 IMX477 on Lattice Crosslink NX with Hard MIPI PHY. Gbps UVC Video Stream Over USB 3.0 with Cypress FX3, Currently WIP
Rappsilber-Laboratory / AlphaLink2AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
bhhbazinga / AOIThe purpose of this project is to compare the performance of three AOI models. They are Crosslink-Model, QuadTree-Model and Tower-Model.
ticcky / EsalibMy implementation of Explicit Semantic Analysis (ESA) library that we used at KMi, Open University to produce our submission at the NTCIR-9 CrossLink task.
orangeSi / GSSplaygroundLightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, directly modify almost all features in Chrome by click the feature
gregdavill / ArcticKoalaDevelopment board for Lattice Crosslink-NX 72QFN
HMakkiMD / PolySMartPerform polymerization and crosslinking in MARTINI coarse-grained forcefield using GROMACS MD package
standardgalactic / KitbashSelf-Refactoring Crosslinking
antmicro / Sdi Mipi Video Converter HwVideo converter based on Lattice CrossLink-NX
circuitvalley / Crosslink NX USB3 BoardsThis repo contains source, Documentation/reference PCB boards for USB3 camera interface with Lattice Crosslink NX FPGA
sam-t-davies / LatticeFPGA CSI2 Jetson NanoLattice Crosslink FPGA is programmed to simulate an IMX219 image stream to a Jetson Nano
zchinet30 / PXLinkXlink is a Python script that uses Gromacs to automatically perfom simulation crosslinking and generate atomistic model of aromatic polyamide membrane separation layer. Currently it can use trimesic acid and m-Phenylenediamine as monomers.
gatecat / Litex Nexus MipiMIPI testing with LiteX on CrossLink-NX
gkudla / Hybhyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data
zhipenglu / CRSSANTPackage for analyzing RNA crosslinking and proximity ligation data (PARIS and beyond)
Rappsilber-Laboratory / XiRTMulti-Dimensional Retention Time Prediction for Linear and Crosslinked Peptides
hgb-bin-proteomics / MSAnnikaMS Annika is a crosslink search engine based on MS Amanda, aimed at identifying crosslinks of cleavable and non-cleavable crosslinkers from MS2 and MS3 spectra.
Jako / CrosslinksManage crosslinks in MODX Revolution
Topf-Lab / XLM ToolsA python program to score protein structures based on Crosslinks (MNXL), Monolinks (MoDS) and both (XLMO).
