40 skills found · Page 1 of 2
connectomicslab / Connectomemapper3Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.
HennyJie / IBGNNMICCAI 2022 (Oral): Interpretable Graph Neural Networks for Connectome-Based Brain Disorder Analysis
StructuralNeurobiologyLab / SyConnToolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
KirstieJane / NSPN WhitakerVertes PNAS2016Data and analysis code to reproduce the NSPN Manuscript "Adolescence is associated with genomically patterned consolidation of the hubs of the human brain connectome".
brain-life / EncodeMethod for encoding brain connectomes in multidimensional arrays (tensors).
ZijianD / Brain TokenGT"Beyond the Snapshot: Brain Tokenized Graph Transformer for Longitudinal Brain Functional Connectome Embedding" (MICCAI 2023)
Owen-Yang-18 / BrainNN PreTrainImplementations for CHIL 2023 paper ''PTGB: Pre-Train Graph Neural Networks for Brain Network Analysis'' and KDD 2022 paper ''Data-Efficient Brain Connectome Analysis via Multi-Task Meta-Learning''
TuragaLab / WormvaeConnectome-constrained Latent Variable Model of Whole-brain Neural Activity, ICLR 2022
guorongwu / DynamicBCDynamic brain connectome analysis toolbox
czarrar / ConnectirFast and memory efficient approach for connectome-wide association studies in R and C++. Uses custom implementation of multivariate distance matrix regression to associate brain and behavior.
erojasoficial-byte / Fly BrainEmbodied Drosophila: 138,639-neuron whole-brain connectome simulation (FlyWire v783) in a biomechanical body (NeuroMechFly v2 / MuJoCo). Vision, olfaction, gustation, flight, and emergent behaviors — all from the real connectome.
furtherAdu / BrainNetCNN PersonalityPersonality prediction from Human Connectome Project fMRI data using BrainNetCNN deep learning model (Kawahara et al. 2016). Project with Dr. Johann Kruschwitz, Division of Mind and Brain at Charite Medical University
sebastientourbier / MultiscalebrainparcellatorMulti-Scale Brain Parcellator, part of the Connectome Mapping Toolkit (CMTK), is a BIDS App that implements a full anatomical MRI processing pipeline, from raw T1w data to structural brain parcellation at five different scales.
braph-software / BRAPHBrain Analysis using Graph Theory
RittmanResearch / MaybrainPython package for analysing and visualising brain connectome data
natverse / FafbsegSupport functions for analysis of Drosophila connectomes especially the FAFB-FlyWire whole brain
fcast7 / Hopf Delay ToolboxThis toolbox allows to simulate interactions between neural mass potentials (resonating at 40Hz) in the structural connectome. Here, a single brain region is seen as an oscillator whose dynamics is explained by a Stuart Landau Equation (Hopf Bifurcation including time delay).
MedicineBiology-AI / BrainMIA network-based method for brain disease gene prediction by integrating brain connectome and molecular network
ejcorn / Connectome DiffusionCode to reproduce all network modeling analyses for Henderson et al. 2019 ("Spread of α-synuclein pathology through the brain connectome is modulated by selective vulnerability and predicted by network analysis").
basiralab / ReproducibleFedGNNInvestigating the reproducibility of federated GNN models
