Results for "bracken"

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jenniferlu717 / KrakenTools

371

KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files

universal

Updated 12d ago

jenniferlu717 / Bracken

339

Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.

universal

Updated 14d ago

angelovangel / Nxf Kraken2

A simple nextflow pipeline for running kraken2 and bracken in a docker container

universal

brackenkraken2metagenomics+2

Updated 5mo ago

sipost1 / Kraken2OTUtable

Creates a simple OTU table from Kraken2 report.

universal

bioinformaticsbrackencommmand-line+6

Updated 4mo ago

acvill / Bracken Plot

A Shiny app for taxonomic abundance visualization

universal

brackenkraken2metagenomics+1

Updated 2mo ago

rotheconrad / Kraken Bracken Plot

Creates stacked bar plots from Kracken and Bracken output.

universal

Updated 5mo ago

BrackenStrike / BrackenPack

No description available

universal

Updated 6d ago

jonasoh / Gracken

Create phylogenetic trees from Bracken/Kraken2 reports

universal

metagenomicsphylogeneticsphyloseq

Updated 4mo ago

ramay / Metakraken

A snakemake pipeline to process metagenomics samples through kraken + bracken to generate taxonomic profiles

universal

Updated 5mo ago