20 skills found
ropensci / BiomartrGenomic Data Retrieval with R
sebriois / BiomartPython biomart API
jrderuiter / PybiomartA simple pythonic interface to biomart.
Huber-group-EMBL / BiomaRtR package providing query functionality to BioMart instances like Ensembl
stefanpeidli / MousipyTranslates an AnnData object with mouse gene symbols into one with human gene symbols by mapping orthologs from biomart.
gitools / GitoolsGitools, is a framework for analysis and visualization of genomic data. Data and results are represented as browsable heatmaps. Gitools allows to import data directly from IntOGen and Biomart.
vitkl / OrthologsBioMARTOne-liner for mapping orthologous genes in both R and python using ENSEMBL BioMART
biomart / BioMartNo description available
Matthew-Mosior / Fasta Region InspectorA bioinformatics tool for analyzing somatic hypermutation
dazoakley / BiomartA ruby API for interacting with Biomart services
daler / BiomartpySimple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)
jokergoo / BioMartGOGeneSetsGene Ontology Gene Sets from BioMart
pasted / Clinical Variant DatabaseRails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensembl dataset. Originally developed as part of a Masters in Bioinformatics project @ University of Exeter
ivanp1994 / PyMartPython interface towards ENSEMBL's BioMart
jzinno / Biomart MCPA MCP server to interface with Biomart
robertopreste / ApybiomartAsync pythonic interface to Biomart.
i-dcc / Martsearch V2MartSearchr - A configurable web services based search interface for Biomart
stevekm / Annotate PeaksScripts for .bed file genomic region annotation with various tools
jonathanBieler / BioMart.jlMake simple requests to Ensembl BioMart database.
i-dcc / Martsearch V1MartSearch - A configurable web services based search interface for Biomart
