83 skills found · Page 1 of 3
GoekeLab / Bioinformatics Workflowsminimal example implementations for bioinformatics workflow managers
stjude-rust-labs / SprocketA bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
refinery-platform / Refinery PlatformThe Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. The platforms consists of three major components: a data repository with rich metadata capabilities, a workflow engine based on the popular Galaxy system, and visualization tools to support the exploration and interpretation of results at all stages of the analysis process.
MG-RAST / AWEworkflow and resource management system for bioinformatics data analysis
BioDepot / BioDepot Workflow Builder:computer: GUI for creating bioinformatics workflows from :whale: Docker containers:
theiagen / Public Health BioinformaticsBioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of pathogens of public health concern.
epam / Pipeline BuilderPipeline Builder is a JavaScript library for visualizing and constructing bioinformatics workflows, using Workflow Description Language (WDL)
stevekm / BioinformaticsBioinformatics analysis scripts, workflows, general code examples
pinin4fjords / Nf MetroMetro-map-style SVG diagrams from Mermaid graph definitions, designed for visualizing bioinformatics pipeline workflows
theiagen / Public Health Viral GenomicsBioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of viral pathogens of concern, especially SARS-CoV-2
biagent-dev / BiaBioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow
stjudecloud / WorkflowsBioinformatics workflows developed for and used on the St. Jude Cloud project.
madhadron / BeinMiniature LIMS and workflow manager for bioinformatics
ncbi / JUDIThis repository contains the source code of JUDI, a workflow management system for developing complex bioinformatics software with many parameter settings. Bioinformatics pipeline: Just Do It!
nanoporetech / Ont Tutorial BasicqcA bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt
StanfordBioinformatics / LoomA tool for running bioinformatics workflows locally or in the cloud.
biocswirl-dev-team / BiocSwirlBiocSwirl is a series of in-depth swirlify generated courses used to teach bioinformatics workflows in R/Bioconductor using an interactive and easy to digest format. This project was the People's Choice Award for the Vancouver Bioinformatics Hackathon Hackseq2019.
sib-swiss / TermalTerminal-based multiple sequence alignment (MSA) viewer designed for remote and HPC bioinformatics workflows.
openbiox / Awesome Bioinformatics Workflow ChineseOpenbiox 翻译小组发起并维护的优秀 Workflow 翻译项目
dxsbiocc / WorkflowThe snakemake analysis workflow for bioinformatics
