Results for "allopolyploid"

Claude Code Claude Desktop GitHub Copilot Cursor Windsurf Cline Zed JetBrains

📄SKILL.md 🤖CLAUDE.md ⚡Claude Commands 📐.cursorrules 📐Cursor Rules 🕹️AGENTS.md 🧬codex.md 🏄.windsurfrules 🔧.clinerules 🧑‍✈️Copilot Instructions

All Development Operations Data Product Marketing Customer Design Sales

6 skills found

zhangrengang / SubPhaser

To phase, partition and visualize subgenomes of a neoallopolyploid or hybrid based on the subgenome-specific repetitive kmers.

universal

allopolyploidexchangekmer+3

Updated 4mo ago

GengruiZhu / KmerGenoPhaser

K-mer specificity + SNP/ML + autoencoder pipeline for ancestry block phasing in allopolyploid genomes. Three modules (supervised / snpml / unsupervised) + karyotype visualization. Supports sugarcane, wheat, and other polyploids.

universal

Updated 7h ago

eead-csic-compbio / Allopolyploids

PhyloSD: Phylogenomic Subgenome Detection pipeline

universal

Updated 1y ago

niederhuth / Replaying The Evolutionary Tape To Investigate Subgenome Dominance

DNA methylation scripts for the paper: Replaying the evolutionary tape to investigate subgenome dominance in allopolyploid Brassica napus

universal

Updated 2y ago

supermaxiste / ARPEGGIO

A SnakeMake workflow to analyse whole genome bisulfite sequencing data from allopolyploids.

universal

allopolyploidautomationbisulfite-sequencing+7

Updated 2y ago

bitdessin / Hespresso

Statistical test for detecting shifts in homeolog expression ratios in allopolyploids

universal

Updated 25d ago