106 skills found · Page 3 of 4
arben-adm / mcp-sequential-thinkingLocal MCP work notes with persistent sessions, decisions, evidence and resumable tasks.
rampstackco / data-warehouse-experimentationRunning experiments out of the data warehouse instead of via dedicated experiment platforms. SQL-based assignment, exposure logging discipline, metric definitions in dbt models, statistical analysis in SQL or Python, variance reduction with CUPED, sequential testing, and the operational tradeoffs vs…
taracodlabs / jupyter-live-kernelStateful Jupyter kernel — variables persist across cells (hamelnb)
indranilbanerjee / seo-driftCompare two SEO exports (Search Console, two dates): gainers, losers, drift classes. \"what moved after the core update\"
indranilbanerjee / keyword-clusterCluster keywords or queries into topic hubs and spoke pages by SERP overlap. \"cluster these keywords\"
MaxFreedomPollard / CompartmentEncrypted, fully offline agentic memory. One click install, GUI w/ memory map, all OS and agents. Superior memory creation, storage and retrieval.
aiskillstore / python-fastapiPython FastAPI development with uv package manager, modular project structure, SQLAlchemy ORM, and production-ready patterns.
aiskillstore / cryptofeedCryptofeed - Real-time cryptocurrency market data feeds from 40+ exchanges. WebSocket streaming, normalized data, order books, trades, tickers. Python library for algorithmic trading and market data analysis.
aiskillstore / python-database-patternsSQLAlchemy and database patterns for Python. Triggers on: sqlalchemy, database, orm, migration, alembic, async database, connection pool, repository pattern, unit of work.
aiskillstore / python-fastapi-patternsFastAPI web framework patterns. Triggers on: fastapi, api endpoint, dependency injection, pydantic model, openapi, swagger, starlette, async api, rest api, uvicorn.
aiskillstore / sqlite-opsPatterns for SQLite databases in Python projects - state management, caching, and async operations. Triggers on: sqlite, sqlite3, aiosqlite, local database, database schema, migration, wal mode.
Microck / biorxiv-databaseEfficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.
jaechang-hits / scikit-bioPython library for biology: sequence manipulation (DNA/RNA/protein), pairwise/multiple alignment, phylogenetic trees (NJ, UPGMA), diversity (Shannon, Faith PD, Bray-Curtis, UniFrac), ordination (PCoA, CCA, RDA), stats (PERMANOVA, ANOSIM, Mantel), file I/O (FASTA, FASTQ, Newick, BIOM).
jaechang-hits / imaging-data-commonsQuery and download NCI Imaging Data Commons (IDC) cancer radiology and pathology datasets via the idc-index Python client. No authentication required: the parquet index ships inside the pip wheel, SQL runs locally via DuckDB, and DICOM downloads stream from public S3/GCS buckets through s5cmd.
jaechang-hits / hmdb-databaseParse HMDB (Human Metabolome Database) local XML for metabolite info, chemical properties, biological context, disease links, spectra, and cross-DB mapping. No REST API — uses ~6 GB XML download. Use drugbank-database-access for drugs; pubchem-compound-search for live lookups.
jaechang-hits / astropy-astronomyCore Python library for astronomy/astrophysics: units with dimensional analysis, celestial coordinate transforms (ICRS/Galactic/AltAz/FK5), FITS I/O, tables (FITS/HDF5/VOTable/CSV), cosmology (Planck18, distance/age), precise time (UTC/TAI/TT/TDB, Julian, barycentric), WCS pixel-world mapping, model…
jaechang-hits / polars-dataframesFast in-memory DataFrame with lazy evaluation, parallel execution, Arrow backend. Use for tabular data in RAM (1–100 GB) when pandas is too slow. Expression API: select, filter, group_by, joins, pivots, window. Lazy mode enables predicate/projection pushdown.
jaechang-hits / alphafold-database-accessAccess AlphaFold DB's 200M+ predicted structures by UniProt ID. Download PDB/mmCIF, analyze pLDDT/PAE, bulk-fetch proteomes via Google Cloud. For experimental structures use PDB; for prediction use ColabFold or ESMFold.
jaechang-hits / pdb-databaseQuery RCSB PDB (200K+ structures) via the public REST + GraphQL APIs with plain `requests` (no SDK). Search by text, attribute, sequence, or 3D structure similarity (Search API); retrieve metadata via GraphQL (Data API); download PDB/mmCIF from files.rcsb.org.
jaechang-hits / reactome-databaseQuery Reactome pathways via REST: pathway queries, entity lookup, keyword search, gene list enrichment, hierarchy, cross-refs. Content + Analysis services. Python wrapper: reactome2py. For KEGG use kegg-database; for PPIs use string-database-ppi.
jaechang-hits / ena-databaseENA REST API for sequences, reads, assemblies, and annotations. Portal API search, Browser API retrieval (XML/FASTA/EMBL), file reports for FASTQ/BAM URLs, taxonomy, cross-refs. For multi-DB Python use bioservices; for NCBI-only use pubmed-database or Biopython Entrez.
jaechang-hits / gget-genomic-databasesUnified CLI/Python interface to 20+ genomic databases. Gene lookups (Ensembl search/info/seq), BLAST/BLAT, AlphaFold, Enrichr enrichment, OpenTargets disease/drug, CELLxGENE single-cell, cBioPortal/COSMIC cancer, ARCHS4 expression. Spans genomics, proteomics, disease.
jaechang-hits / kegg-databaseKEGG REST API (academic only). Pathways, genes, compounds, enzymes, diseases, drugs via 7 ops (info/list/find/get/conv/link/ddi). ID conversion (NCBI/UniProt/PubChem). Use bioservices for multi-DB Python.
jaechang-hits / gseapy-gene-enrichmentGSEA and over-representation analysis (ORA) for RNA-seq and proteomics. Wraps Enrichr for ORA against MSigDB, KEGG, GO, and 200+ databases; runs preranked GSEA on ranked DE gene lists. Outputs enrichment tables and running-score plots. Use after DESeq2 or edgeR for pathway-level interpretation.
datadrivenconstruction / labor-productivity-analyticsAnalyze construction labor productivity using data analytics. Track worker performance, identify inefficiencies, predict resource needs, and optimize crew allocation for maximum efficiency.
datadrivenconstruction / portfolio-dashboardMulti-project portfolio analytics dashboard. Aggregate KPIs across projects, track portfolio health, compare performance, and support executive decision-making.
datadrivenconstruction / weather-impact-analysisAnalyze weather data impact on construction schedules. Predict weather delays, optimize work scheduling based on forecasts, and calculate weather-related risk factors for project planning.
datadrivenconstruction / dwg-to-excelConvert AutoCAD DWG files (1983-2026) to Excel databases using DwgExporter CLI. Extract layers, blocks, attributes, and geometry data without Autodesk licenses.
datadrivenconstruction / ifc-to-excelConvert IFC files (2x3, 4x1, 4x3) to Excel databases using IfcExporter CLI. Extract BIM data, properties, and geometry without proprietary software.
datadrivenconstruction / cwicr-data-loaderLoad and parse DDC CWICR construction cost database from multiple formats: Parquet, Excel, CSV, Qdrant snapshots. Foundation for all CWICR operations.
