ReLIVE
An interactive explorer for ligand-receptor interaction based on single-cell RNA-Seq data
Install / Use
/learn @wu-2018/ReLIVEREADME
ReLIVE - Receptors-Ligands Interaction Visualization Explorer
This is a tool for visualizing interactions between ligands and receptors, initially designed for single-cell RNA-Seq data.
Recently I've launched this web app online, available at https://wu-2018.github.io/relive
For better performance, please download this repository and run it on your own device. Follow the instruction at Deploy
Currently two plot panels are available, the Cell-Cell plot and Cell-Gene Plot
Deploy
To run it on your own machine, simply run:
git clone https://github.com/wu-2018/ReLIVE.git
then
python3 ReLIVE/run.py start
Now, your browser will pop up! If not, please manually input and visit http://localhost:5006
Prerequisite
- Python3
- Python3 Libraries:
- bokeh>=0.13.0
- flask
- pandas
- scipy
Related Skills
node-connect
337.1kDiagnose OpenClaw node connection and pairing failures for Android, iOS, and macOS companion apps
frontend-design
83.1kCreate distinctive, production-grade frontend interfaces with high design quality. Use this skill when the user asks to build web components, pages, or applications. Generates creative, polished code that avoids generic AI aesthetics.
openai-whisper-api
337.1kTranscribe audio via OpenAI Audio Transcriptions API (Whisper).
commit-push-pr
83.1kCommit, push, and open a PR
