CTracks
repo for project with a higlass component and a variant table component
Install / Use
/learn @visdesignlab/CTracksREADME
Introduction
cTracks enables dynamic track visualization of various Next Generation Sequencing (NGS)measurements (e.g. b-allele frequency, reads, log2 values) in two genome browser-like views, leveraging the existing package Higlass. A top frame displays a general view along chromosomes, while a bottom frame offers a zoomed-in view of specific NGS measures along with gene information. Additional measurements (e.g. Copy Number Variation data) are displayed accordingly in a sortable table.
A docker instance is also available: ctracks-docker
Installation
npm install
npm start
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