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AMAS

AMAS (Automatic Model Annotation System): (currently) predicting annotations of species and reactions of models in SBML format.

Install / Use

/learn @sys-bio/AMAS
About this skill

Quality Score

0/100

Supported Platforms

Universal

README

AMAS: Automatic Model Annotation System

AMAS (Automatic Model Annotation System) predicts and recommends annotations for systems biology models. It uses information of species and reactions in the SBML models and provides recommendations. The algorithm uses ChEBI for species annotations, and Rhea for reaction annotations. AMAS was developed and tested using BioModels and BiGG.

For more information, please check our Read the Docs page.

View on GitHub
GitHub Stars7
CategoryProduct
Updated8mo ago
Forks2

Languages

Jupyter Notebook

Security Score

77/100

Audited on Jul 24, 2025

No findings