Research Software Ecosystem (RSEc) contents repository

This repository contains the metadata aggregated for the Research Software Ecosystem (RSEc). The purpose of this repository is to act as a central place for the exchange of these metadata for multiple projects, including bio.tools, Biocontainers, Bioconda, OpenEBench, Debian Med, BIII.eu, etc.

Contents outline

All software metadata are in the data folder of this repository, each software package/tool being in a distinct folder, which contains multiple files. Each of these files contains the metadata regarding the software coming from a specific resource, or reformatted in a specific format.

# Example for the contents of the 'fastqc' folder:
fastqc.biotools.json # metadata for the fastqc bio.tools entry (pulled by RSEc bot)
bioconda_fastqc.yaml # metadata for the bioconda fastqc package (pulled by RSEc bot)
biocontainers.yaml # metadata for the fastqc biocontainers image (pushed by biocontainers bot)
fastqc.oeb.metrics.json  # metadata for the OpenEBench fastqc package metrics (pulled by RSEc bot)
fastqc.debian.yaml  # metadata for the Debian Med fastqc package (pulled by RSEc bot)
fastqc.bioschemas.jsonld  # metadata for the fastqc package, converted from bio.tools metadata (pulled by RSEc bot)