mrivis

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mrivis offers intuitive high-level classes for visualization of medical imaging data including:

advanced classes to easily develop customizable visualizations of 3D and 4D images, such as Carpet(), SlicePicker(), Collage() and the like
tools for comparison of spatial alignment of two 3D MRI scans (T1, T2, PET etc) using checkerboard plots and other comparison methods
additional helper, convenience and utility scripts related to visualization

Full documentation for both visualization classes and alignment check tools is available at

https://raamana.github.io/mrivis/readme.html

A sample gallery of different ways to check alignment (just one of the many other features in mrivis) is shown below:

.. image:: docs/flyer_option_matrix.png

Full documentation https://raamana.github.io/mrivis/readme.html

Executable and interactive demo for the visualization classes:

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Installation

.. code-block:: console

$ pip install mrivis

If you would like to use the export to GIF from SlicePicker, then install the imageio package as well via pip install imageio

Mrivis

Install / Use

README

mrivis